Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SYCNQ0VAF6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
SYCNQ0VAF6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SYCNQ0VAF6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
SYCNQ0VAF6 LINC00167-201ENST00000530583 1419 ntBASIC11.77□□□□□ -0.52
SYCNQ0VAF6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SYCNQ0VAF6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC11.77□□□□□ -0.52
SYCNQ0VAF6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
SYCNQ0VAF6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
SYCNQ0VAF6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.52
SYCNQ0VAF6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC11.77□□□□□ -0.52
SYCNQ0VAF6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SYCNQ0VAF6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
SYCNQ0VAF6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 HES2-202ENST00000377836 507 ntTSL 2 BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 AC005521.1-201ENST00000393351 872 ntBASIC11.77□□□□□ -0.53
SYCNQ0VAF6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 KRT18P65-201ENST00000439811 1286 ntBASIC11.77□□□□□ -0.53
SYCNQ0VAF6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 HOMER2P1-201ENST00000455653 964 ntBASIC11.77□□□□□ -0.53
SYCNQ0VAF6 AC092647.4-201ENST00000457211 535 ntBASIC11.77□□□□□ -0.53
SYCNQ0VAF6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 AC012306.2-201ENST00000609350 630 ntBASIC11.77□□□□□ -0.53
SYCNQ0VAF6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SYCNQ0VAF6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 AC006116.8-202ENST00000587620 1550 ntBASIC11.76□□□□□ -0.53
SYCNQ0VAF6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 RNF152P1-201ENST00000397754 604 ntBASIC11.76□□□□□ -0.53
SYCNQ0VAF6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 ZNF444P1-201ENST00000559497 298 ntBASIC11.76□□□□□ -0.53
SYCNQ0VAF6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 LINC00896-202ENST00000609602 2128 ntBASIC11.76□□□□□ -0.53
SYCNQ0VAF6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SYCNQ0VAF6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms