Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
IRX4P78413 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.51■□□□□ 0.55
IRX4P78413 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IRX4P78413 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IRX4P78413 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IRX4P78413 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IRX4P78413 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
IRX4P78413 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
IRX4P78413 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.5■□□□□ 0.55
IRX4P78413 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IRX4P78413 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IRX4P78413 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
IRX4P78413 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IRX4P78413 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IRX4P78413 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.5■□□□□ 0.55
IRX4P78413 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IRX4P78413 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.5■□□□□ 0.55
IRX4P78413 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.5■□□□□ 0.55
IRX4P78413 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.5■□□□□ 0.55
IRX4P78413 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.5■□□□□ 0.55
IRX4P78413 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
IRX4P78413 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IRX4P78413 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
IRX4P78413 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IRX4P78413 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IRX4P78413 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IRX4P78413 KRT8P32-201ENST00000512863 1461 ntBASIC18.5■□□□□ 0.55
IRX4P78413 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IRX4P78413 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IRX4P78413 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
IRX4P78413 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
IRX4P78413 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IRX4P78413 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
IRX4P78413 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IRX4P78413 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
IRX4P78413 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.5■□□□□ 0.55
IRX4P78413 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
IRX4P78413 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.49■□□□□ 0.55
IRX4P78413 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
IRX4P78413 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.49■□□□□ 0.55
IRX4P78413 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IRX4P78413 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IRX4P78413 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
IRX4P78413 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IRX4P78413 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IRX4P78413 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IRX4P78413 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
IRX4P78413 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IRX4P78413 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IRX4P78413 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IRX4P78413 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.49■□□□□ 0.55
IRX4P78413 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.49■□□□□ 0.55
IRX4P78413 AC104819.1-201ENST00000504587 486 ntBASIC18.49■□□□□ 0.55
IRX4P78413 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.49■□□□□ 0.55
IRX4P78413 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.49■□□□□ 0.55
IRX4P78413 AL121912.1-201ENST00000603683 238 ntBASIC18.49■□□□□ 0.55
IRX4P78413 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IRX4P78413 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
IRX4P78413 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IRX4P78413 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.49■□□□□ 0.55
IRX4P78413 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.49■□□□□ 0.55
IRX4P78413 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.49■□□□□ 0.55
IRX4P78413 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
IRX4P78413 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IRX4P78413 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IRX4P78413 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.48■□□□□ 0.55
IRX4P78413 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
IRX4P78413 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
IRX4P78413 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IRX4P78413 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IRX4P78413 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.48■□□□□ 0.55
IRX4P78413 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IRX4P78413 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
IRX4P78413 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.48■□□□□ 0.55
IRX4P78413 KRT16P4-201ENST00000453883 522 ntBASIC18.48■□□□□ 0.55
IRX4P78413 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.48■□□□□ 0.55
IRX4P78413 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.48■□□□□ 0.55
IRX4P78413 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.48■□□□□ 0.55
IRX4P78413 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IRX4P78413 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.48■□□□□ 0.55
IRX4P78413 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
IRX4P78413 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.48■□□□□ 0.55
IRX4P78413 AC138894.3-201ENST00000603787 634 ntBASIC18.48■□□□□ 0.55
IRX4P78413 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
IRX4P78413 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IRX4P78413 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
IRX4P78413 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IRX4P78413 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.48■□□□□ 0.55
IRX4P78413 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IRX4P78413 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.48■□□□□ 0.55
IRX4P78413 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.48■□□□□ 0.55
IRX4P78413 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
IRX4P78413 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.48■□□□□ 0.55
IRX4P78413 Z83836.1-201ENST00000624605 1642 ntBASIC18.48■□□□□ 0.55
IRX4P78413 PRORSD1P-202ENST00000563365 2154 ntBASIC18.48■□□□□ 0.55
IRX4P78413 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
IRX4P78413 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IRX4P78413 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IRX4P78413 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
IRX4P78413 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms