Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.01■□□□□ 0.31
VSX2P58304 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
VSX2P58304 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VSX2P58304 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
VSX2P58304 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VSX2P58304 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.01■□□□□ 0.31
VSX2P58304 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.01■□□□□ 0.31
VSX2P58304 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
VSX2P58304 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VSX2P58304 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
VSX2P58304 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VSX2P58304 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17■□□□□ 0.31
VSX2P58304 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
VSX2P58304 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VSX2P58304 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17■□□□□ 0.31
VSX2P58304 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
VSX2P58304 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17■□□□□ 0.31
VSX2P58304 CCS-201ENST00000310190 942 ntTSL 5 BASIC17■□□□□ 0.31
VSX2P58304 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VSX2P58304 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17■□□□□ 0.31
VSX2P58304 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17■□□□□ 0.31
VSX2P58304 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17■□□□□ 0.31
VSX2P58304 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17■□□□□ 0.31
VSX2P58304 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17■□□□□ 0.31
VSX2P58304 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17■□□□□ 0.31
VSX2P58304 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VSX2P58304 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17■□□□□ 0.31
VSX2P58304 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17■□□□□ 0.31
VSX2P58304 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17■□□□□ 0.31
VSX2P58304 MIR5100-201ENST00000579544 119 ntBASIC17■□□□□ 0.31
VSX2P58304 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17■□□□□ 0.31
VSX2P58304 AL121894.2-201ENST00000602977 491 ntBASIC17■□□□□ 0.31
VSX2P58304 AL591684.3-201ENST00000605187 298 ntBASIC17■□□□□ 0.31
VSX2P58304 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
VSX2P58304 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17■□□□□ 0.31
VSX2P58304 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17■□□□□ 0.31
VSX2P58304 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17■□□□□ 0.31
VSX2P58304 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17■□□□□ 0.31
VSX2P58304 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VSX2P58304 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17■□□□□ 0.31
VSX2P58304 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17■□□□□ 0.31
VSX2P58304 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17■□□□□ 0.31
VSX2P58304 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17■□□□□ 0.31
VSX2P58304 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VSX2P58304 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17■□□□□ 0.31
VSX2P58304 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
VSX2P58304 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
VSX2P58304 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.99■□□□□ 0.31
VSX2P58304 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
VSX2P58304 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.99■□□□□ 0.31
VSX2P58304 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.99■□□□□ 0.31
VSX2P58304 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VSX2P58304 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
VSX2P58304 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
VSX2P58304 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.99■□□□□ 0.31
VSX2P58304 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.99■□□□□ 0.31
VSX2P58304 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VSX2P58304 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VSX2P58304 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VSX2P58304 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.99■□□□□ 0.31
VSX2P58304 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.99■□□□□ 0.31
VSX2P58304 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VSX2P58304 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.99■□□□□ 0.31
VSX2P58304 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.99■□□□□ 0.31
VSX2P58304 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.99■□□□□ 0.31
VSX2P58304 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VSX2P58304 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VSX2P58304 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VSX2P58304 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VSX2P58304 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
VSX2P58304 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.99■□□□□ 0.31
VSX2P58304 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VSX2P58304 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VSX2P58304 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VSX2P58304 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VSX2P58304 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VSX2P58304 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VSX2P58304 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.99■□□□□ 0.31
VSX2P58304 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.99■□□□□ 0.31
VSX2P58304 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.99■□□□□ 0.31
VSX2P58304 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VSX2P58304 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VSX2P58304 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
VSX2P58304 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VSX2P58304 PCDHB18P-201ENST00000524813 2368 ntBASIC16.99■□□□□ 0.31
VSX2P58304 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VSX2P58304 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.98■□□□□ 0.31
VSX2P58304 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.98■□□□□ 0.31
VSX2P58304 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VSX2P58304 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.98■□□□□ 0.31
VSX2P58304 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VSX2P58304 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
VSX2P58304 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VSX2P58304 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VSX2P58304 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.98■□□□□ 0.31
VSX2P58304 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VSX2P58304 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.98■□□□□ 0.31
VSX2P58304 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
VSX2P58304 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VSX2P58304 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms