Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CDR1P51861 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR1P51861 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CDR1P51861 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.45■□□□□ 0.7
CDR1P51861 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CDR1P51861 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR1P51861 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.45■□□□□ 0.7
CDR1P51861 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR1P51861 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR1P51861 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.45■□□□□ 0.7
CDR1P51861 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.45■□□□□ 0.7
CDR1P51861 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR1P51861 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDR1P51861 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.45■□□□□ 0.7
CDR1P51861 KRT8P26-201ENST00000534154 1276 ntBASIC19.45■□□□□ 0.7
CDR1P51861 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.45■□□□□ 0.7
CDR1P51861 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.45■□□□□ 0.7
CDR1P51861 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR1P51861 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.45■□□□□ 0.7
CDR1P51861 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR1P51861 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR1P51861 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR1P51861 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDR1P51861 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR1P51861 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR1P51861 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR1P51861 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.45■□□□□ 0.7
CDR1P51861 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.45■□□□□ 0.7
CDR1P51861 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR1P51861 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR1P51861 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.45■□□□□ 0.7
CDR1P51861 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR1P51861 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.45■□□□□ 0.7
CDR1P51861 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDR1P51861 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR1P51861 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR1P51861 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CDR1P51861 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR1P51861 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CDR1P51861 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CDR1P51861 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.44■□□□□ 0.7
CDR1P51861 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDR1P51861 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR1P51861 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR1P51861 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CDR1P51861 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDR1P51861 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CDR1P51861 LINC00265-3P-201ENST00000447588 903 ntBASIC19.44■□□□□ 0.7
CDR1P51861 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.44■□□□□ 0.7
CDR1P51861 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.44■□□□□ 0.7
CDR1P51861 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.44■□□□□ 0.7
CDR1P51861 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR1P51861 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CDR1P51861 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDR1P51861 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR1P51861 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDR1P51861 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDR1P51861 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDR1P51861 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.44■□□□□ 0.7
CDR1P51861 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR1P51861 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR1P51861 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
CDR1P51861 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDR1P51861 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CDR1P51861 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.44■□□□□ 0.7
CDR1P51861 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR1P51861 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR1P51861 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDR1P51861 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDR1P51861 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CDR1P51861 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR1P51861 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDR1P51861 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR1P51861 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.43■□□□□ 0.7
CDR1P51861 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDR1P51861 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR1P51861 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDR1P51861 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR1P51861 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR1P51861 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR1P51861 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR1P51861 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR1P51861 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CDR1P51861 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CDR1P51861 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.43■□□□□ 0.7
CDR1P51861 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.43■□□□□ 0.7
CDR1P51861 AP000867.3-201ENST00000524675 377 ntBASIC19.43■□□□□ 0.7
CDR1P51861 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR1P51861 KRT126P-201ENST00000549467 1181 ntBASIC19.43■□□□□ 0.7
CDR1P51861 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.43■□□□□ 0.7
CDR1P51861 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.43■□□□□ 0.7
CDR1P51861 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.43■□□□□ 0.7
CDR1P51861 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDR1P51861 AC024563.2-201ENST00000603282 481 ntBASIC19.43■□□□□ 0.7
CDR1P51861 AL390719.2-201ENST00000606993 987 ntBASIC19.43■□□□□ 0.7
CDR1P51861 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CDR1P51861 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR1P51861 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR1P51861 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDR1P51861 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms