Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
USP11P51784 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.05■□□□□ 0.8
USP11P51784 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.05■□□□□ 0.8
USP11P51784 AC106795.1-205ENST00000512851 1056 ntBASIC20.05■□□□□ 0.8
USP11P51784 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.05■□□□□ 0.8
USP11P51784 AC019129.2-201ENST00000609837 1235 ntBASIC20.05■□□□□ 0.8
USP11P51784 AP000867.4-201ENST00000641616 219 ntBASIC20.05■□□□□ 0.8
USP11P51784 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
USP11P51784 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP11P51784 AC005332.8-201ENST00000622750 2735 ntBASIC20.05■□□□□ 0.8
USP11P51784 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
USP11P51784 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.05■□□□□ 0.8
USP11P51784 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP11P51784 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP11P51784 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.05■□□□□ 0.8
USP11P51784 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.05■□□□□ 0.8
USP11P51784 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.05■□□□□ 0.8
USP11P51784 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.05■□□□□ 0.8
USP11P51784 AL353593.2-201ENST00000602529 1483 ntBASIC20.05■□□□□ 0.8
USP11P51784 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP11P51784 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP11P51784 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.04■□□□□ 0.8
USP11P51784 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.04■□□□□ 0.8
USP11P51784 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.04■□□□□ 0.8
USP11P51784 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP11P51784 AP005117.1-201ENST00000584346 1413 ntBASIC20.04■□□□□ 0.8
USP11P51784 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP11P51784 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP11P51784 SIRPAP1-201ENST00000448467 1770 ntBASIC20.04■□□□□ 0.8
USP11P51784 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.04■□□□□ 0.8
USP11P51784 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP11P51784 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
USP11P51784 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP11P51784 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.04■□□□□ 0.8
USP11P51784 AC002558.1-201ENST00000488906 803 ntBASIC20.04■□□□□ 0.8
USP11P51784 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.04■□□□□ 0.8
USP11P51784 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
USP11P51784 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.04■□□□□ 0.8
USP11P51784 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP11P51784 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP11P51784 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP11P51784 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
USP11P51784 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP11P51784 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP11P51784 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
USP11P51784 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
USP11P51784 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.03■□□□□ 0.8
USP11P51784 AL133373.2-201ENST00000623187 2828 ntBASIC20.03■□□□□ 0.8
USP11P51784 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.03■□□□□ 0.8
USP11P51784 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.03■□□□□ 0.8
USP11P51784 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP11P51784 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
USP11P51784 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
USP11P51784 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP11P51784 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP11P51784 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
USP11P51784 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.03■□□□□ 0.8
USP11P51784 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP11P51784 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP11P51784 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.03■□□□□ 0.8
USP11P51784 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.03■□□□□ 0.8
USP11P51784 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.03■□□□□ 0.8
USP11P51784 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP11P51784 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.03■□□□□ 0.8
USP11P51784 RN7SL510P-201ENST00000581311 263 ntBASIC20.03■□□□□ 0.8
USP11P51784 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.03■□□□□ 0.8
USP11P51784 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.03■□□□□ 0.8
USP11P51784 AL691432.3-201ENST00000621860 400 ntBASIC20.03■□□□□ 0.8
USP11P51784 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP11P51784 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
USP11P51784 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
USP11P51784 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP11P51784 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
USP11P51784 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.03■□□□□ 0.8
USP11P51784 PMPCAP1-201ENST00000508114 1576 ntBASIC20.03■□□□□ 0.8
USP11P51784 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP11P51784 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.03■□□□□ 0.8
USP11P51784 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP11P51784 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.03■□□□□ 0.8
USP11P51784 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.02■□□□□ 0.8
USP11P51784 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP11P51784 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP11P51784 KRT8P10-201ENST00000450021 1447 ntBASIC20.02■□□□□ 0.8
USP11P51784 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
USP11P51784 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.02■□□□□ 0.8
USP11P51784 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP11P51784 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP11P51784 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.02■□□□□ 0.8
USP11P51784 AKR1C7P-201ENST00000305623 895 ntBASIC20.02■□□□□ 0.8
USP11P51784 RBM17P3-201ENST00000417687 1192 ntBASIC20.02■□□□□ 0.8
USP11P51784 SAPCD2P3-201ENST00000455031 850 ntBASIC20.02■□□□□ 0.8
USP11P51784 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.02■□□□□ 0.8
USP11P51784 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.02■□□□□ 0.8
USP11P51784 AP001269.4-201ENST00000609611 512 ntBASIC20.02■□□□□ 0.8
USP11P51784 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.02■□□□□ 0.8
USP11P51784 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.02■□□□□ 0.8
USP11P51784 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP11P51784 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.02■□□□□ 0.8
USP11P51784 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.02■□□□□ 0.8
USP11P51784 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms