Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHC1P29353 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHC1P29353 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.3■□□□□ 0.2
SHC1P29353 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.3■□□□□ 0.2
SHC1P29353 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.3■□□□□ 0.2
SHC1P29353 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHC1P29353 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SHC1P29353 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHC1P29353 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHC1P29353 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHC1P29353 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHC1P29353 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHC1P29353 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SHC1P29353 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHC1P29353 AC016734.2-201ENST00000624325 1377 ntBASIC16.29■□□□□ 0.2
SHC1P29353 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHC1P29353 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.29■□□□□ 0.2
SHC1P29353 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHC1P29353 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHC1P29353 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SHC1P29353 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHC1P29353 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHC1P29353 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHC1P29353 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHC1P29353 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHC1P29353 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHC1P29353 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHC1P29353 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SHC1P29353 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHC1P29353 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.29■□□□□ 0.2
SHC1P29353 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.29■□□□□ 0.2
SHC1P29353 AC008687.5-201ENST00000593746 558 ntBASIC16.29■□□□□ 0.2
SHC1P29353 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.29■□□□□ 0.2
SHC1P29353 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.29■□□□□ 0.2
SHC1P29353 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHC1P29353 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHC1P29353 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SHC1P29353 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.29■□□□□ 0.2
SHC1P29353 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHC1P29353 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.29■□□□□ 0.2
SHC1P29353 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.29■□□□□ 0.2
SHC1P29353 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHC1P29353 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.29■□□□□ 0.2
SHC1P29353 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHC1P29353 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHC1P29353 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.29■□□□□ 0.2
SHC1P29353 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
SHC1P29353 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.28■□□□□ 0.2
SHC1P29353 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.28■□□□□ 0.2
SHC1P29353 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.28■□□□□ 0.2
SHC1P29353 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.28■□□□□ 0.2
SHC1P29353 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.28■□□□□ 0.2
SHC1P29353 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.28■□□□□ 0.2
SHC1P29353 KRT8P26-201ENST00000534154 1276 ntBASIC16.28■□□□□ 0.2
SHC1P29353 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.28■□□□□ 0.2
SHC1P29353 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.28■□□□□ 0.2
SHC1P29353 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.28■□□□□ 0.2
SHC1P29353 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
SHC1P29353 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SHC1P29353 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.28■□□□□ 0.2
SHC1P29353 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHC1P29353 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SHC1P29353 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SHC1P29353 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SHC1P29353 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHC1P29353 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.27■□□□□ 0.2
SHC1P29353 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SHC1P29353 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.27■□□□□ 0.2
SHC1P29353 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHC1P29353 AC108860.2-201ENST00000562760 2183 ntBASIC16.27■□□□□ 0.2
SHC1P29353 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHC1P29353 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
SHC1P29353 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHC1P29353 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHC1P29353 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHC1P29353 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHC1P29353 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHC1P29353 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms