Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMA1P25391 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.25■□□□□ 0.35
LAMA1P25391 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.25■□□□□ 0.35
LAMA1P25391 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.25■□□□□ 0.35
LAMA1P25391 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMA1P25391 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMA1P25391 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LAMA1P25391 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.25■□□□□ 0.35
LAMA1P25391 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.25■□□□□ 0.35
LAMA1P25391 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.25■□□□□ 0.35
LAMA1P25391 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMA1P25391 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMA1P25391 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LAMA1P25391 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMA1P25391 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.25■□□□□ 0.35
LAMA1P25391 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LAMA1P25391 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMA1P25391 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMA1P25391 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LAMA1P25391 AC004461.1-201ENST00000412461 403 ntBASIC17.24■□□□□ 0.35
LAMA1P25391 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.24■□□□□ 0.35
LAMA1P25391 AC087641.1-201ENST00000557561 1021 ntBASIC17.24■□□□□ 0.35
LAMA1P25391 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.24■□□□□ 0.35
LAMA1P25391 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.24■□□□□ 0.35
LAMA1P25391 AC004790.2-201ENST00000623588 572 ntBASIC17.24■□□□□ 0.35
LAMA1P25391 AL805961.1-202ENST00000641562 540 ntBASIC17.24■□□□□ 0.35
LAMA1P25391 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.24■□□□□ 0.35
LAMA1P25391 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.24■□□□□ 0.35
LAMA1P25391 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LAMA1P25391 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMA1P25391 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.24■□□□□ 0.35
LAMA1P25391 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.24■□□□□ 0.35
LAMA1P25391 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMA1P25391 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LAMA1P25391 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.24■□□□□ 0.35
LAMA1P25391 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.24■□□□□ 0.35
LAMA1P25391 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMA1P25391 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMA1P25391 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMA1P25391 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
LAMA1P25391 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.24■□□□□ 0.35
LAMA1P25391 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMA1P25391 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
LAMA1P25391 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
LAMA1P25391 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LAMA1P25391 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMA1P25391 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.24■□□□□ 0.35
LAMA1P25391 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LAMA1P25391 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.24■□□□□ 0.35
LAMA1P25391 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.24■□□□□ 0.35
LAMA1P25391 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LAMA1P25391 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.24■□□□□ 0.35
LAMA1P25391 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LAMA1P25391 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LAMA1P25391 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMA1P25391 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.23■□□□□ 0.35
LAMA1P25391 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LAMA1P25391 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
LAMA1P25391 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LAMA1P25391 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.23■□□□□ 0.35
LAMA1P25391 MIR661-201ENST00000384842 89 ntBASIC17.23■□□□□ 0.35
LAMA1P25391 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LAMA1P25391 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LAMA1P25391 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
LAMA1P25391 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMA1P25391 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMA1P25391 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.23■□□□□ 0.35
LAMA1P25391 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMA1P25391 BCAR1-209ENST00000546196 1340 ntBASIC17.23■□□□□ 0.35
LAMA1P25391 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.23■□□□□ 0.35
LAMA1P25391 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.23■□□□□ 0.35
LAMA1P25391 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.23■□□□□ 0.35
LAMA1P25391 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
LAMA1P25391 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.23■□□□□ 0.35
LAMA1P25391 LINC00628-201ENST00000628516 1289 ntBASIC17.23■□□□□ 0.35
LAMA1P25391 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
LAMA1P25391 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.23■□□□□ 0.35
LAMA1P25391 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
LAMA1P25391 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.23■□□□□ 0.35
LAMA1P25391 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LAMA1P25391 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.22■□□□□ 0.35
LAMA1P25391 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMA1P25391 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.22■□□□□ 0.35
LAMA1P25391 CRYGEP-201ENST00000412192 528 ntBASIC17.22■□□□□ 0.35
LAMA1P25391 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.22■□□□□ 0.35
LAMA1P25391 RN7SL204P-201ENST00000582831 262 ntBASIC17.22■□□□□ 0.35
LAMA1P25391 AP000997.3-201ENST00000623333 2250 ntBASIC17.22■□□□□ 0.35
LAMA1P25391 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LAMA1P25391 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMA1P25391 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.22■□□□□ 0.35
LAMA1P25391 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMA1P25391 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMA1P25391 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.22■□□□□ 0.35
LAMA1P25391 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMA1P25391 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LAMA1P25391 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LAMA1P25391 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LAMA1P25391 AC122714.2-201ENST00000502787 707 ntBASIC17.22■□□□□ 0.35
LAMA1P25391 AC093214.1-201ENST00000511688 1107 ntBASIC17.22■□□□□ 0.35
LAMA1P25391 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms