Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCND1P24385 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCND1P24385 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCND1P24385 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCND1P24385 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.92■□□□□ 0.46
CCND1P24385 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCND1P24385 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCND1P24385 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.91■□□□□ 0.46
CCND1P24385 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.91■□□□□ 0.46
CCND1P24385 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.91■□□□□ 0.46
CCND1P24385 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.91■□□□□ 0.46
CCND1P24385 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCND1P24385 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
CCND1P24385 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCND1P24385 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCND1P24385 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCND1P24385 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCND1P24385 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCND1P24385 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.91■□□□□ 0.46
CCND1P24385 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCND1P24385 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCND1P24385 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.91■□□□□ 0.46
CCND1P24385 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCND1P24385 AC113347.1-201ENST00000413321 391 ntBASIC17.91■□□□□ 0.46
CCND1P24385 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCND1P24385 ATP5G1P1-201ENST00000448724 379 ntBASIC17.91■□□□□ 0.46
CCND1P24385 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCND1P24385 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.91■□□□□ 0.46
CCND1P24385 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.91■□□□□ 0.46
CCND1P24385 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCND1P24385 AC104390.1-201ENST00000555663 520 ntBASIC17.91■□□□□ 0.46
CCND1P24385 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.91■□□□□ 0.46
CCND1P24385 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.91■□□□□ 0.46
CCND1P24385 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCND1P24385 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCND1P24385 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCND1P24385 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCND1P24385 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.91■□□□□ 0.46
CCND1P24385 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCND1P24385 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCND1P24385 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.91■□□□□ 0.46
CCND1P24385 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCND1P24385 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CCND1P24385 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.91■□□□□ 0.46
CCND1P24385 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCND1P24385 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCND1P24385 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.91■□□□□ 0.46
CCND1P24385 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.9■□□□□ 0.46
CCND1P24385 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCND1P24385 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.9■□□□□ 0.46
CCND1P24385 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCND1P24385 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCND1P24385 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCND1P24385 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.9■□□□□ 0.46
CCND1P24385 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCND1P24385 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCND1P24385 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCND1P24385 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCND1P24385 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.9■□□□□ 0.46
CCND1P24385 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCND1P24385 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCND1P24385 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCND1P24385 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.9■□□□□ 0.46
CCND1P24385 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCND1P24385 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.9■□□□□ 0.46
CCND1P24385 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.9■□□□□ 0.46
CCND1P24385 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.9■□□□□ 0.46
CCND1P24385 AC141257.4-201ENST00000634557 245 ntBASIC17.9■□□□□ 0.46
CCND1P24385 AC136944.6-201ENST00000634818 245 ntBASIC17.9■□□□□ 0.46
CCND1P24385 AL031432.5-201ENST00000641059 760 ntBASIC17.9■□□□□ 0.46
CCND1P24385 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCND1P24385 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCND1P24385 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCND1P24385 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CCND1P24385 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CCND1P24385 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCND1P24385 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CCND1P24385 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCND1P24385 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.9■□□□□ 0.46
CCND1P24385 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CCND1P24385 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCND1P24385 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCND1P24385 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCND1P24385 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCND1P24385 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CCND1P24385 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCND1P24385 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CCND1P24385 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCND1P24385 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
CCND1P24385 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCND1P24385 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCND1P24385 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
CCND1P24385 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCND1P24385 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCND1P24385 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.89■□□□□ 0.45
CCND1P24385 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCND1P24385 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCND1P24385 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCND1P24385 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.89■□□□□ 0.45
CCND1P24385 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms