Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.75■□□□□ 0.272e-6■■■□□ 16.9
RPS3P23396 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.132e-6■■■□□ 16.9
RPS3P23396 PIPOX-204ENST00000469082 760 ntTSL 512□□□□□ -0.495e-6■■■□□ 16.9
RPS3P23396 PIPOX-205ENST00000484308 1038 ntTSL 311.63□□□□□ -0.555e-6■■■□□ 16.9
RPS3P23396 HMGCR-203ENST00000442032 268 ntTSL 35.85□□□□□ -1.473e-10■■■□□ 16.9
RPS3P23396 HMGCR-205ENST00000507942 527 ntTSL 45.54□□□□□ -1.523e-10■■■□□ 16.9
RPS3P23396 RPL8-214ENST00000534781 716 ntTSL 213.92□□□□□ -0.182e-15■■■□□ 16.8
RPS3P23396 SUN2-217ENST00000480307 560 ntTSL 315.46■□□□□ 0.071e-6■■■□□ 16.8
RPS3P23396 JPT1-207ENST00000481094 382 ntTSL 514.09□□□□□ -0.159e-14■■■□□ 16.8
RPS3P23396 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.372e-6■■■□□ 16.8
RPS3P23396 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.472e-6■■■□□ 16.8
RPS3P23396 LAMP1-203ENST00000472564 5242 ntTSL 216.49■□□□□ 0.235e-8■■■□□ 16.8
RPS3P23396 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.633e-7■■■□□ 16.8
RPS3P23396 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.443e-7■■■□□ 16.8
RPS3P23396 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.343e-7■■■□□ 16.8
RPS3P23396 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.35■□□□□ 0.053e-7■■■□□ 16.8
RPS3P23396 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC11.43□□□□□ -0.583e-7■■■□□ 16.8
RPS3P23396 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.56□□□□□ -1.362e-7■■■□□ 16.8
RPS3P23396 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.73□□□□□ -1.492e-7■■■□□ 16.8
RPS3P23396 CLPTM1-204ENST00000585961 572 ntTSL 419.12■□□□□ 0.658e-15■■■□□ 16.8
RPS3P23396 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.52e-6■■■□□ 16.8
RPS3P23396 TSPAN9-206ENST00000537971 4284 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.542e-6■■■□□ 16.8
RPS3P23396 PRCP-217ENST00000534396 737 ntTSL 513□□□□□ -0.335e-7■■■□□ 16.8
RPS3P23396 PRCP-209ENST00000531128 546 ntTSL 57.55□□□□□ -1.25e-7■■■□□ 16.8
RPS3P23396 MARS-210ENST00000548146 558 ntTSL 411.21□□□□□ -0.613e-10■■■□□ 16.8
RPS3P23396 QARS-249ENST00000637113 1369 ntTSL 515.95■□□□□ 0.141e-7■■■□□ 16.8
RPS3P23396 QARS-208ENST00000459870 1317 ntTSL 513.33□□□□□ -0.281e-7■■■□□ 16.8
RPS3P23396 DCTN2-215ENST00000550201 1527 ntTSL 512.8□□□□□ -0.364e-7■■■□□ 16.8
RPS3P23396 DCTN2-201ENST00000434715 1677 ntTSL 5 BASIC11.92□□□□□ -0.54e-7■■■□□ 16.8
RPS3P23396 DCTN2-212ENST00000549394 1439 ntTSL 211.4□□□□□ -0.584e-7■■■□□ 16.8
RPS3P23396 DCTN2-209ENST00000548249 2061 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.784e-7■■■□□ 16.8
RPS3P23396 DCTN2-202ENST00000543672 1321 ntAPPRIS ALT1 TSL 5 BASIC9.26□□□□□ -0.934e-7■■■□□ 16.8
RPS3P23396 QARS-207ENST00000453392 859 ntTSL 59.1□□□□□ -0.951e-7■■■□□ 16.8
RPS3P23396 QARS-250ENST00000637281 1327 ntTSL 56.73□□□□□ -1.331e-7■■■□□ 16.8
RPS3P23396 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.49□□□□□ -1.215e-7■■■□□ 16.8
RPS3P23396 ETFA-201ENST00000267950 1289 ntTSL 521.03■□□□□ 0.962e-7■■■□□ 16.8
RPS3P23396 ETFA-215ENST00000560595 917 ntTSL 1 (best)20.01■□□□□ 0.792e-7■■■□□ 16.8
RPS3P23396 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.37■□□□□ 0.692e-7■■■□□ 16.8
RPS3P23396 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.26■□□□□ 0.512e-7■■■□□ 16.8
RPS3P23396 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.84■□□□□ 0.292e-7■■■□□ 16.8
RPS3P23396 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.262e-7■■■□□ 16.8
RPS3P23396 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.323e-7■■■□□ 16.8
RPS3P23396 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.132e-6■■■□□ 16.8
RPS3P23396 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.252e-6■■■□□ 16.8
RPS3P23396 TYMS-205ENST00000581920 886 ntTSL 57.15□□□□□ -1.263e-8■■■□□ 16.8
RPS3P23396 REEP5-205ENST00000504247 480 ntTSL 5 BASIC12.72□□□□□ -0.377e-7■■■□□ 16.8
RPS3P23396 RPS4X-202ENST00000373626 594 ntTSL 38.5□□□□□ -1.056e-11■■■□□ 16.8
RPS3P23396 AZGP1-204ENST00000477251 787 ntTSL 215.37■□□□□ 0.051e-8■■■□□ 16.8
RPS3P23396 TALDO1-208ENST00000532685 568 ntTSL 217.61■□□□□ 0.419e-12■■■□□ 16.8
RPS3P23396 DPP4-207ENST00000490286 2241 ntTSL 510.37□□□□□ -0.759e-7■■■□□ 16.8
RPS3P23396 CPVL-211ENST00000458405 525 ntTSL 410.26□□□□□ -0.772e-7■■■□□ 16.8
RPS3P23396 CPVL-206ENST00000447426 553 ntTSL 56.05□□□□□ -1.442e-7■■■□□ 16.8
RPS3P23396 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.21■□□□□ 0.511e-7■■■□□ 16.8
RPS3P23396 ICAM1-201ENST00000264832 3252 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.761e-7■■■□□ 16.8
RPS3P23396 SYNGR2-208ENST00000591770 864 ntTSL 215.25■□□□□ 0.032e-7■■■□□ 16.8
RPS3P23396 ATP2A2-208ENST00000549840 503 ntTSL 58.01□□□□□ -1.132e-7■■■□□ 16.8
RPS3P23396 ATP2A2-205ENST00000547050 1176 ntTSL 44.98□□□□□ -1.612e-7■■■□□ 16.8
RPS3P23396 C3-206ENST00000596179 280 ntTSL 31.55□□□□□ -2.161e-61■■■□□ 16.8
RPS3P23396 ATP5L-208ENST00000534385 623 ntTSL 27.91□□□□□ -1.145e-21■■■□□ 16.8
RPS3P23396 CEACAM1-206ENST00000403136 1778 ntTSL 1 (best)13.2□□□□□ -0.34e-7■■■□□ 16.8
RPS3P23396 CD151-210ENST00000526661 894 ntTSL 222.51■■□□□ 1.193e-7■■■□□ 16.8
RPS3P23396 CD151-216ENST00000530155 493 ntTSL 418.97■□□□□ 0.633e-7■■■□□ 16.8
RPS3P23396 CD151-206ENST00000525333 561 ntTSL 418.97■□□□□ 0.633e-7■■■□□ 16.8
RPS3P23396 CD151-207ENST00000525718 565 ntTSL 217.32■□□□□ 0.363e-7■■■□□ 16.8
RPS3P23396 CD151-219ENST00000531999 580 ntTSL 315.37■□□□□ 0.053e-7■■■□□ 16.8
RPS3P23396 CD151-208ENST00000525868 541 ntTSL 415.14■□□□□ 0.013e-7■■■□□ 16.8
RPS3P23396 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.582e-6■■■□□ 16.8
RPS3P23396 MINOS1-NBL1-202ENST00000602384 999 ntTSL 517.35■□□□□ 0.372e-6■■■□□ 16.8
RPS3P23396 MINOS1-NBL1-203ENST00000602450 590 ntTSL 217.1■□□□□ 0.332e-6■■■□□ 16.8
RPS3P23396 MINOS1-NBL1-201ENST00000602293 820 ntTSL 314.93□□□□□ -0.022e-6■■■□□ 16.8
RPS3P23396 MINOS1-209ENST00000498642 669 ntTSL 214.69□□□□□ -0.062e-6■■■□□ 16.8
RPS3P23396 MINOS1-205ENST00000481464 657 ntTSL 313.67□□□□□ -0.222e-6■■■□□ 16.8
RPS3P23396 MINOS1-203ENST00000467029 583 ntTSL 213.33□□□□□ -0.282e-6■■■□□ 16.8
RPS3P23396 MINOS1-210ENST00000617872 3678 ntTSL 2 BASIC10.9□□□□□ -0.662e-6■■■□□ 16.8
RPS3P23396 MINOS1-201ENST00000322753 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.672e-6■■■□□ 16.8
RPS3P23396 MINOS1-206ENST00000485362 438 ntTSL 24.87□□□□□ -1.632e-6■■■□□ 16.8
RPS3P23396 SEC24C-205ENST00000496827 948 ntTSL 311.99□□□□□ -0.499e-7■■■□□ 16.8
RPS3P23396 CLSTN3-208ENST00000538933 583 ntTSL 312.08□□□□□ -0.481e-6■■■□□ 16.8
RPS3P23396 SERPINA1-211ENST00000553327 581 ntTSL 310.77□□□□□ -0.698e-59■■■□□ 16.7
RPS3P23396 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.956e-7■■■□□ 16.7
RPS3P23396 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC12.72□□□□□ -0.376e-7■■■□□ 16.7
RPS3P23396 REEP5-206ENST00000511865 1187 ntTSL 211.94□□□□□ -0.56e-7■■■□□ 16.7
RPS3P23396 CEACAM1-202ENST00000344391 1619 ntTSL 1 (best)16.2■□□□□ 0.181e-6■■■□□ 16.7
RPS3P23396 CEACAM1-205ENST00000377806 1773 ntTSL 1 (best)12.12□□□□□ -0.471e-6■■■□□ 16.7
RPS3P23396 GLB1-210ENST00000461475 816 ntTSL 315.78■□□□□ 0.124e-7■■■□□ 16.7
RPS3P23396 GLB1-218ENST00000497796 899 ntTSL 315.35■□□□□ 0.054e-7■■■□□ 16.7
RPS3P23396 PSMB2-201ENST00000373237 2701 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.596e-8■■■□□ 16.7
RPS3P23396 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.37■■□□□ 1.175e-8■■■□□ 16.7
RPS3P23396 EEF1D-206ENST00000524397 957 ntTSL 316.79■□□□□ 0.285e-8■■■□□ 16.7
RPS3P23396 EEF1D-221ENST00000528382 308 ntTSL 516.51■□□□□ 0.235e-8■■■□□ 16.7
RPS3P23396 EEF1D-253ENST00000534380 1001 ntTSL 513.2□□□□□ -0.35e-8■■■□□ 16.7
RPS3P23396 SPARC-205ENST00000522348 497 ntTSL 39.64□□□□□ -0.877e-7■■■□□ 16.7
RPS3P23396 FGG-203ENST00000404648 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.058e-18■■■□□ 16.7
RPS3P23396 FGG-204ENST00000405164 1539 ntTSL 5 BASIC7.35□□□□□ -1.238e-18■■■□□ 16.7
RPS3P23396 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.6□□□□□ -1.518e-18■■■□□ 16.7
RPS3P23396 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.01□□□□□ -1.618e-18■■■□□ 16.7
RPS3P23396 FGG-212ENST00000492082 2031 ntTSL 54.9□□□□□ -1.638e-18■■■□□ 16.7
RPS3P23396 MLF2-209ENST00000541346 1234 ntTSL 516.22■□□□□ 0.194e-7■■■□□ 16.7
RPS3P23396 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC12.01□□□□□ -0.492e-9■■■□□ 16.7
RPS3P23396 MCCC2-206ENST00000509539 895 ntTSL 39.92□□□□□ -0.828e-7■■■□□ 16.7
Retrieved 100 of 24,271 protein–RNA pairs in 253.6 ms