RNA–Protein interactions for RNA: ENST00000547050.1

ATP2A2-205, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

TSL 4

Gene ATP2A2, Length 1,176 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-205ENST00000547050 AEBP2Q6ZN18 517 aaPredicted RBP35.18■■■■□ 3.22
ATP2A2-205ENST00000547050 CHIC1Q5VXU3 224 aa33■■■□□ 2.87
ATP2A2-205ENST00000547050 SENP3Q9H4L4 574 aaPredicted RBP30.01■■■□□ 2.39
ATP2A2-205ENST00000547050 PHF23Q9BUL5 403 aaPredicted RBP29.59■■■□□ 2.33
ATP2A2-205ENST00000547050 FOXD1Q16676 465 aa28.05■■■□□ 2.08
ATP2A2-205ENST00000547050 POTEDQ86YR6 584 aa26.39■■□□□ 1.82
ATP2A2-205ENST00000547050 MSH5O43196 834 aa26.34■■□□□ 1.81
ATP2A2-205ENST00000547050 PLPPR3Q6T4P5 718 aa26.2■■□□□ 1.78
ATP2A2-205ENST00000547050 PIAS4Q8N2W9 510 aaPredicted RBP26.16■■□□□ 1.78
ATP2A2-205ENST00000547050 PPP6R1Q9UPN7 881 aa25.97■■□□□ 1.75
ATP2A2-205ENST00000547050 ADRA2BP18089 450 aa25.89■■□□□ 1.74
ATP2A2-205ENST00000547050 MAPK8IP2Q13387 824 aaPredicted RBP23.9■■□□□ 1.42
ATP2A2-205ENST00000547050 DMRT2Q9Y5R5 561 aa23.74■■□□□ 1.39
ATP2A2-205ENST00000547050 SCAF1Q9H7N4 1312 aaKnown RBP23.59■■□□□ 1.37
ATP2A2-205ENST00000547050 PPP4R3CPQ6ZMV5 832 aa22.95■■□□□ 1.26
ATP2A2-205ENST00000547050 DCAF8L1A6NGE4 600 aa22.92■■□□□ 1.26
ATP2A2-205ENST00000547050 CACNB1Q02641 598 aaPredicted RBP22.9■■□□□ 1.26
ATP2A2-205ENST00000547050 HOXD11P31277 338 aaPredicted RBP22.69■■□□□ 1.22
ATP2A2-205ENST00000547050 CNKSR2Q8WXI2 1034 aa22.56■■□□□ 1.2
ATP2A2-205ENST00000547050 RNF39Q9H2S5 420 aa22.46■■□□□ 1.19
ATP2A2-205ENST00000547050 RNF216Q9NWF9 866 aaPredicted RBP22.44■■□□□ 1.18
ATP2A2-205ENST00000547050 C1QBPQ07021 282 aaKnown RBP22.08■■□□□ 1.13
ATP2A2-205ENST00000547050 NCBP3Q53F19 620 aaKnown RBP21.91■■□□□ 1.1
ATP2A2-205ENST00000547050 DNAJC5BQ9UF47 199 aa21.88■■□□□ 1.09
ATP2A2-205ENST00000547050 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.71■■□□□ 1.07
ATP2A2-205ENST00000547050 NPM3O75607 178 aaKnown RBP21.65■■□□□ 1.06
ATP2A2-205ENST00000547050 U3KPZ7 1027 aaPredicted RBP21.2■□□□□ 0.98
ATP2A2-205ENST00000547050 SPINK5Q9NQ38 1064 aaPredicted RBP21.04■□□□□ 0.96
ATP2A2-205ENST00000547050 CAPN15O75808 1086 aa21.02■□□□□ 0.96
ATP2A2-205ENST00000547050 KCNA4P22459 653 aa20.94■□□□□ 0.94
ATP2A2-205ENST00000547050 DSG3P32926 999 aa20.93■□□□□ 0.94
ATP2A2-205ENST00000547050 SLC4A2P04920 1241 aa20.76■□□□□ 0.91
ATP2A2-205ENST00000547050 TRHP20396 242 aaPredicted RBP20.62■□□□□ 0.89
ATP2A2-205ENST00000547050 POTEHQ6S545 545 aa20.61■□□□□ 0.89
ATP2A2-205ENST00000547050 ABCB7O75027 752 aa20.54■□□□□ 0.88
ATP2A2-205ENST00000547050 APLP2Q06481 763 aa20.49■□□□□ 0.87
ATP2A2-205ENST00000547050 ZNF219Q9P2Y4 722 aaPredicted RBP20.47■□□□□ 0.87
ATP2A2-205ENST00000547050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.39■□□□□ 0.85
ATP2A2-205ENST00000547050 HNRNPUL2Q1KMD3 747 aaKnown RBP20.39■□□□□ 0.85
ATP2A2-205ENST00000547050 SAMD1Q6SPF0 538 aaPredicted RBP20.28■□□□□ 0.84
ATP2A2-205ENST00000547050 MYCNP04198 464 aaPredicted RBP20■□□□□ 0.79
ATP2A2-205ENST00000547050 RBM42Q9BTD8 480 aaKnown RBP19.94■□□□□ 0.78
ATP2A2-205ENST00000547050 POLA2Q14181 598 aa19.93■□□□□ 0.78
ATP2A2-205ENST00000547050 CHRDL2Q6WN34 429 aa19.7■□□□□ 0.74
ATP2A2-205ENST00000547050 SLC4A1APQ9BWU0 796 aaKnown RBP19.68■□□□□ 0.74
ATP2A2-205ENST00000547050 ATF5Q9Y2D1 282 aaPredicted RBP19.64■□□□□ 0.73
ATP2A2-205ENST00000547050 FOXD4L1Q9NU39 408 aa19.61■□□□□ 0.73
ATP2A2-205ENST00000547050 ZBTB12Q9Y330 459 aaPredicted RBP19.43■□□□□ 0.7
ATP2A2-205ENST00000547050 AKT1S1Q96B36 256 aa19.41■□□□□ 0.7
ATP2A2-205ENST00000547050 OSCARQ8IYS5 282 aa19.36■□□□□ 0.69
ATP2A2-205ENST00000547050 REM2Q8IYK8 340 aaPredicted RBP19.27■□□□□ 0.68
ATP2A2-205ENST00000547050 ZBTB22O15209 634 aa19.26■□□□□ 0.67
ATP2A2-205ENST00000547050 PIP4P2Q8N4L2 257 aa19.17■□□□□ 0.66
ATP2A2-205ENST00000547050 SP7Q8TDD2 431 aaPredicted RBP19.14■□□□□ 0.65
ATP2A2-205ENST00000547050 PITPNM1O00562 1244 aa19.1■□□□□ 0.65
ATP2A2-205ENST00000547050 ATXN8OSP0DMR3 200 aa18.96■□□□□ 0.63
ATP2A2-205ENST00000547050 HAX1O00165 279 aa18.94■□□□□ 0.62
ATP2A2-205ENST00000547050 FXR2P51116 673 aaKnown RBP eCLIP18.94■□□□□ 0.629e-11■□□□□ 8.2
ATP2A2-205ENST00000547050 FBLN2P98095 1184 aa18.84■□□□□ 0.61
ATP2A2-205ENST00000547050 SPDYE2BA6NHP3 402 aa18.81■□□□□ 0.6
ATP2A2-205ENST00000547050 SPDYE6P0CI01 402 aa18.81■□□□□ 0.6
ATP2A2-205ENST00000547050 SPDYE2Q495Y8 402 aa18.81■□□□□ 0.6
ATP2A2-205ENST00000547050 MKRN4PQ13434 485 aaPredicted RBP18.69■□□□□ 0.58
ATP2A2-205ENST00000547050 EVX2Q03828 476 aa18.68■□□□□ 0.58
ATP2A2-205ENST00000547050 CLEC11AQ9Y240 323 aa18.67■□□□□ 0.58
ATP2A2-205ENST00000547050 PRKAR2AP13861 404 aaKnown RBP18.61■□□□□ 0.57
ATP2A2-205ENST00000547050 SPDYE1Q8NFV5 336 aaPredicted RBP18.58■□□□□ 0.56
ATP2A2-205ENST00000547050 ZNF692Q9BU19 519 aaPredicted RBP18.58■□□□□ 0.56
ATP2A2-205ENST00000547050 SSUH2Q9Y2M2 353 aa18.53■□□□□ 0.56
ATP2A2-205ENST00000547050 CHADLQ6NUI6 762 aa18.37■□□□□ 0.53
ATP2A2-205ENST00000547050 C19orf67A6NJJ6 358 aa18.36■□□□□ 0.53
ATP2A2-205ENST00000547050 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
ATP2A2-205ENST00000547050 PRR29P0C7W0 189 aa18.25■□□□□ 0.51
ATP2A2-205ENST00000547050 GABBR2O75899 941 aa18.21■□□□□ 0.51
ATP2A2-205ENST00000547050 CSRNP3Q8WYN3 585 aa18.01■□□□□ 0.47
ATP2A2-205ENST00000547050 CD44P16070 742 aaKnown RBP18■□□□□ 0.47
ATP2A2-205ENST00000547050 FARP1Q9Y4F1 1045 aaPredicted RBP17.98■□□□□ 0.47
ATP2A2-205ENST00000547050 LHX8Q68G74 356 aa17.95■□□□□ 0.46
ATP2A2-205ENST00000547050 POTEIP0CG38 1075 aa17.83■□□□□ 0.44
ATP2A2-205ENST00000547050 CREBZFQ9NS37 354 aa17.71■□□□□ 0.43
ATP2A2-205ENST00000547050 EHMT2Q96KQ7 1210 aa17.69■□□□□ 0.42
ATP2A2-205ENST00000547050 ZRANB1Q9UGI0 708 aa17.69■□□□□ 0.42
ATP2A2-205ENST00000547050 DCBLD2Q96PD2 775 aa17.66■□□□□ 0.42
ATP2A2-205ENST00000547050 CLCN6P51797 869 aa17.65■□□□□ 0.42
ATP2A2-205ENST00000547050 ZNF579Q8NAF0 562 aaKnown RBP17.64■□□□□ 0.41
ATP2A2-205ENST00000547050 STAG3Q9UJ98 1225 aa17.64■□□□□ 0.41
ATP2A2-205ENST00000547050 SPDYE4A6NLX3 237 aa17.62■□□□□ 0.41
ATP2A2-205ENST00000547050 GALR2O43603 387 aaPredicted RBP17.52■□□□□ 0.4
ATP2A2-205ENST00000547050 PHF12Q96QT6 1004 aa17.44■□□□□ 0.38
ATP2A2-205ENST00000547050 PAK3O75914 559 aaPredicted RBP17.43■□□□□ 0.38
ATP2A2-205ENST00000547050 NPM1P06748 294 aaKnown RBP eCLIP17.34■□□□□ 0.37
ATP2A2-205ENST00000547050 MNX1P50219 401 aaPredicted RBP17.34■□□□□ 0.37
ATP2A2-205ENST00000547050 POTEB2H3BUK9 544 aa17.25■□□□□ 0.35
ATP2A2-205ENST00000547050 OTUD5Q96G74 571 aa17.24■□□□□ 0.35
ATP2A2-205ENST00000547050 PELP1Q8IZL8 1130 aaKnown RBP17.21■□□□□ 0.35
ATP2A2-205ENST00000547050 PLSCR2Q9NRY7 297 aa17.19■□□□□ 0.34
ATP2A2-205ENST00000547050 MS4A3Q96HJ5 214 aa17.17■□□□□ 0.34
ATP2A2-205ENST00000547050 TSPYL2Q9H2G4 693 aaPredicted RBP17.11■□□□□ 0.33
ATP2A2-205ENST00000547050 METRNQ9UJH8 293 aa17.07■□□□□ 0.32
ATP2A2-205ENST00000547050 ASTLQ6HA08 431 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms