Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NELFEP18615 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NELFEP18615 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NELFEP18615 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NELFEP18615 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NELFEP18615 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NELFEP18615 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NELFEP18615 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NELFEP18615 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NELFEP18615 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NELFEP18615 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NELFEP18615 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
NELFEP18615 PKD1P1-201ENST00000458669 6805 ntBASIC17.58■□□□□ 0.41
NELFEP18615 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
NELFEP18615 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
NELFEP18615 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NELFEP18615 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.58■□□□□ 0.41
NELFEP18615 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
NELFEP18615 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NELFEP18615 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NELFEP18615 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
NELFEP18615 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.58■□□□□ 0.4
NELFEP18615 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.58■□□□□ 0.4
NELFEP18615 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NELFEP18615 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NELFEP18615 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NELFEP18615 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.58■□□□□ 0.4
NELFEP18615 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NELFEP18615 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NELFEP18615 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.58■□□□□ 0.4
NELFEP18615 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.58■□□□□ 0.4
NELFEP18615 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.58■□□□□ 0.4
NELFEP18615 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.58■□□□□ 0.4
NELFEP18615 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.58■□□□□ 0.4
NELFEP18615 AC090616.6-201ENST00000582640 721 ntBASIC17.58■□□□□ 0.4
NELFEP18615 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NELFEP18615 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.58■□□□□ 0.4
NELFEP18615 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NELFEP18615 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NELFEP18615 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NELFEP18615 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
NELFEP18615 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NELFEP18615 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NELFEP18615 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
NELFEP18615 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NELFEP18615 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NELFEP18615 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NELFEP18615 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NELFEP18615 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.58■□□□□ 0.4
NELFEP18615 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NELFEP18615 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.58■□□□□ 0.4
NELFEP18615 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.57■□□□□ 0.4
NELFEP18615 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.57■□□□□ 0.4
NELFEP18615 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.57■□□□□ 0.4
NELFEP18615 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
NELFEP18615 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.57■□□□□ 0.4
NELFEP18615 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NELFEP18615 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.57■□□□□ 0.4
NELFEP18615 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.57■□□□□ 0.4
NELFEP18615 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.57■□□□□ 0.4
NELFEP18615 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.57■□□□□ 0.4
NELFEP18615 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.57■□□□□ 0.4
NELFEP18615 TPSP2-201ENST00000561760 610 ntBASIC17.57■□□□□ 0.4
NELFEP18615 PRELID1P1-202ENST00000567272 903 ntBASIC17.57■□□□□ 0.4
NELFEP18615 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NELFEP18615 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.57■□□□□ 0.4
NELFEP18615 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.57■□□□□ 0.4
NELFEP18615 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
NELFEP18615 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.57■□□□□ 0.4
NELFEP18615 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NELFEP18615 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
NELFEP18615 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.56■□□□□ 0.4
NELFEP18615 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NELFEP18615 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NELFEP18615 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NELFEP18615 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NELFEP18615 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NELFEP18615 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms