Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL5A2P05997 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC23.16■■□□□ 1.3
COL5A2P05997 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.16■■□□□ 1.3
COL5A2P05997 EFTUD1P1-204ENST00000560401 1798 ntBASIC23.16■■□□□ 1.3
COL5A2P05997 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL5A2P05997 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL5A2P05997 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC23.16■■□□□ 1.3
COL5A2P05997 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC23.16■■□□□ 1.3
COL5A2P05997 COPE-202ENST00000349893 948 ntTSL 2 BASIC23.16■■□□□ 1.3
COL5A2P05997 PMS2P4-201ENST00000412466 1052 ntBASIC23.16■■□□□ 1.3
COL5A2P05997 FAM185BP-201ENST00000443595 716 ntBASIC23.16■■□□□ 1.3
COL5A2P05997 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC23.16■■□□□ 1.3
COL5A2P05997 TIMM8BP1-201ENST00000452384 211 ntBASIC23.16■■□□□ 1.3
COL5A2P05997 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL5A2P05997 TAF8-206ENST00000472818 719 ntTSL 2 BASIC23.16■■□□□ 1.3
COL5A2P05997 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC23.16■■□□□ 1.3
COL5A2P05997 RPL28-209ENST00000560055 670 ntTSL 3 BASIC23.16■■□□□ 1.3
COL5A2P05997 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC23.16■■□□□ 1.3
COL5A2P05997 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC23.16■■□□□ 1.3
COL5A2P05997 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
COL5A2P05997 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC23.16■■□□□ 1.3
COL5A2P05997 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
COL5A2P05997 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL5A2P05997 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC23.15■■□□□ 1.3
COL5A2P05997 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC23.15■■□□□ 1.3
COL5A2P05997 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
COL5A2P05997 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL5A2P05997 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
COL5A2P05997 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
COL5A2P05997 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL5A2P05997 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL5A2P05997 AC067863.1-201ENST00000494933 530 ntBASIC23.15■■□□□ 1.3
COL5A2P05997 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC23.15■■□□□ 1.3
COL5A2P05997 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL5A2P05997 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL5A2P05997 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL5A2P05997 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC23.15■■□□□ 1.3
COL5A2P05997 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL5A2P05997 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL5A2P05997 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL5A2P05997 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC23.15■■□□□ 1.3
COL5A2P05997 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL5A2P05997 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL5A2P05997 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.15■■□□□ 1.3
COL5A2P05997 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL5A2P05997 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
COL5A2P05997 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.3
COL5A2P05997 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL5A2P05997 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL5A2P05997 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
COL5A2P05997 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC23.14■■□□□ 1.3
COL5A2P05997 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
COL5A2P05997 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC23.14■■□□□ 1.3
COL5A2P05997 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC23.14■■□□□ 1.3
COL5A2P05997 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
COL5A2P05997 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL5A2P05997 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL5A2P05997 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
COL5A2P05997 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL5A2P05997 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL5A2P05997 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC23.14■■□□□ 1.29
COL5A2P05997 AC093214.1-201ENST00000511688 1107 ntBASIC23.14■■□□□ 1.29
COL5A2P05997 KRT8P48-201ENST00000515599 1220 ntBASIC23.14■■□□□ 1.29
COL5A2P05997 DUX4L27-201ENST00000554796 1261 ntBASIC23.14■■□□□ 1.29
COL5A2P05997 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC23.14■■□□□ 1.29
COL5A2P05997 AC051619.7-201ENST00000568314 623 ntBASIC23.14■■□□□ 1.29
COL5A2P05997 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC23.14■■□□□ 1.29
COL5A2P05997 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC23.14■■□□□ 1.29
COL5A2P05997 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL5A2P05997 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL5A2P05997 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL5A2P05997 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
COL5A2P05997 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
COL5A2P05997 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL5A2P05997 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL5A2P05997 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL5A2P05997 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL5A2P05997 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL5A2P05997 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC23.13■■□□□ 1.29
COL5A2P05997 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC23.13■■□□□ 1.29
COL5A2P05997 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL5A2P05997 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
COL5A2P05997 AL513480.1-201ENST00000451731 511 ntBASIC23.13■■□□□ 1.29
COL5A2P05997 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
COL5A2P05997 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC23.13■■□□□ 1.29
COL5A2P05997 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL5A2P05997 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC23.13■■□□□ 1.29
COL5A2P05997 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
COL5A2P05997 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL5A2P05997 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
COL5A2P05997 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL5A2P05997 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL5A2P05997 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL5A2P05997 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL5A2P05997 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL5A2P05997 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL5A2P05997 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL5A2P05997 MIR661-201ENST00000384842 89 ntBASIC23.12■■□□□ 1.29
COL5A2P05997 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC23.12■■□□□ 1.29
COL5A2P05997 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms