Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC233702.3-201ENST00000578656 1387 ntBASIC16.38■□□□□ 0.21
NKX2-2O95096 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NKX2-2O95096 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.38■□□□□ 0.21
NKX2-2O95096 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.38■□□□□ 0.21
NKX2-2O95096 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
NKX2-2O95096 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.38■□□□□ 0.21
NKX2-2O95096 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NKX2-2O95096 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.38■□□□□ 0.21
NKX2-2O95096 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX2-2O95096 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.38■□□□□ 0.21
NKX2-2O95096 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX2-2O95096 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
NKX2-2O95096 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX2-2O95096 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX2-2O95096 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX2-2O95096 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.38■□□□□ 0.21
NKX2-2O95096 AC002558.1-201ENST00000488906 803 ntBASIC16.38■□□□□ 0.21
NKX2-2O95096 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NKX2-2O95096 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.38■□□□□ 0.21
NKX2-2O95096 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.38■□□□□ 0.21
NKX2-2O95096 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.38■□□□□ 0.21
NKX2-2O95096 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.38■□□□□ 0.21
NKX2-2O95096 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.38■□□□□ 0.21
NKX2-2O95096 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NKX2-2O95096 AP002414.4-201ENST00000589764 1148 ntBASIC16.38■□□□□ 0.21
NKX2-2O95096 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
NKX2-2O95096 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NKX2-2O95096 AC069148.1-201ENST00000608741 768 ntBASIC16.38■□□□□ 0.21
NKX2-2O95096 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
NKX2-2O95096 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX2-2O95096 AC090340.1-201ENST00000620778 4980 ntBASIC16.38■□□□□ 0.21
NKX2-2O95096 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
NKX2-2O95096 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.38■□□□□ 0.21
NKX2-2O95096 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NKX2-2O95096 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX2-2O95096 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX2-2O95096 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.38■□□□□ 0.21
NKX2-2O95096 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.38■□□□□ 0.21
NKX2-2O95096 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NKX2-2O95096 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NKX2-2O95096 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
NKX2-2O95096 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NKX2-2O95096 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NKX2-2O95096 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX2-2O95096 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NKX2-2O95096 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NKX2-2O95096 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
NKX2-2O95096 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.37■□□□□ 0.21
NKX2-2O95096 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NKX2-2O95096 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.37■□□□□ 0.21
NKX2-2O95096 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
NKX2-2O95096 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.37■□□□□ 0.21
NKX2-2O95096 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.37■□□□□ 0.21
NKX2-2O95096 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.37■□□□□ 0.21
NKX2-2O95096 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.37■□□□□ 0.21
NKX2-2O95096 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
NKX2-2O95096 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.37■□□□□ 0.21
NKX2-2O95096 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.37■□□□□ 0.21
NKX2-2O95096 AC122714.2-201ENST00000502787 707 ntBASIC16.37■□□□□ 0.21
NKX2-2O95096 AC009533.2-201ENST00000543664 586 ntBASIC16.37■□□□□ 0.21
NKX2-2O95096 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.37■□□□□ 0.21
NKX2-2O95096 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.37■□□□□ 0.21
NKX2-2O95096 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
NKX2-2O95096 MIR3180-1-201ENST00000580374 94 ntBASIC16.37■□□□□ 0.21
NKX2-2O95096 MIR3180-3-201ENST00000584616 94 ntBASIC16.37■□□□□ 0.21
NKX2-2O95096 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.37■□□□□ 0.21
NKX2-2O95096 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 NPAP1P7-201ENST00000613027 823 ntBASIC16.37■□□□□ 0.21
NKX2-2O95096 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.37■□□□□ 0.21
NKX2-2O95096 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.37■□□□□ 0.21
NKX2-2O95096 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
NKX2-2O95096 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.37■□□□□ 0.21
NKX2-2O95096 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
NKX2-2O95096 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 HTR7P1-202ENST00000624664 4411 ntBASIC16.37■□□□□ 0.21
NKX2-2O95096 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NKX2-2O95096 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NKX2-2O95096 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
NKX2-2O95096 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms