Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN11O75508 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN11O75508 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN11O75508 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN11O75508 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN11O75508 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN11O75508 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN11O75508 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN11O75508 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN11O75508 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN11O75508 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN11O75508 AF238378.1-201ENST00000526806 358 ntBASIC18.13■□□□□ 0.49
CLDN11O75508 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN11O75508 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN11O75508 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
CLDN11O75508 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN11O75508 AL121894.2-201ENST00000602977 491 ntBASIC18.13■□□□□ 0.49
CLDN11O75508 AL121912.1-201ENST00000603683 238 ntBASIC18.13■□□□□ 0.49
CLDN11O75508 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN11O75508 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CLDN11O75508 AL355877.3-201ENST00000622820 899 ntBASIC18.13■□□□□ 0.49
CLDN11O75508 AD001527.2-201ENST00000622994 785 ntBASIC18.13■□□□□ 0.49
CLDN11O75508 AP000867.4-201ENST00000641616 219 ntBASIC18.13■□□□□ 0.49
CLDN11O75508 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN11O75508 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN11O75508 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN11O75508 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CLDN11O75508 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN11O75508 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLDN11O75508 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
CLDN11O75508 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN11O75508 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CLDN11O75508 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN11O75508 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN11O75508 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN11O75508 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN11O75508 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN11O75508 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN11O75508 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN11O75508 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN11O75508 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN11O75508 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CLDN11O75508 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN11O75508 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN11O75508 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN11O75508 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLDN11O75508 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN11O75508 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN11O75508 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CLDN11O75508 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLDN11O75508 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN11O75508 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.12■□□□□ 0.49
CLDN11O75508 AC008608.2-201ENST00000606089 416 ntBASIC18.12■□□□□ 0.49
CLDN11O75508 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN11O75508 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN11O75508 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN11O75508 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN11O75508 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN11O75508 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN11O75508 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN11O75508 SIRPAP1-201ENST00000448467 1770 ntBASIC18.12■□□□□ 0.49
CLDN11O75508 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN11O75508 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN11O75508 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN11O75508 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN11O75508 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN11O75508 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN11O75508 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN11O75508 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CLDN11O75508 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CLDN11O75508 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN11O75508 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN11O75508 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN11O75508 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN11O75508 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.11■□□□□ 0.49
CLDN11O75508 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN11O75508 MTDHP3-201ENST00000594186 672 ntBASIC18.11■□□□□ 0.49
CLDN11O75508 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN11O75508 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN11O75508 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN11O75508 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN11O75508 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN11O75508 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN11O75508 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN11O75508 AL049757.1-201ENST00000616842 1596 ntBASIC18.11■□□□□ 0.49
CLDN11O75508 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN11O75508 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN11O75508 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN11O75508 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN11O75508 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN11O75508 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLDN11O75508 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN11O75508 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN11O75508 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
CLDN11O75508 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN11O75508 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN11O75508 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CLDN11O75508 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN11O75508 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CLDN11O75508 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms