Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 AC024563.2-201ENST00000603282 481 ntBASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 IGHV3-41-201ENST00000613121 348 ntBASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 LINC00265-3P-201ENST00000447588 903 ntBASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 AC009102.3-201ENST00000623118 1491 ntBASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TCRBV4S1A1TA0A5B7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SIRPAP1-201ENST00000448467 1770 ntBASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 MIR149-201ENST00000384879 89 ntBASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 AP002383.4-201ENST00000442518 975 ntBASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 AP000867.3-201ENST00000524675 377 ntBASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 AC090616.6-201ENST00000582640 721 ntBASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.3□□□□□ -0.12
TCRBV4S1A1TA0A5B7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV4S1A1TA0A5B7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms