Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 SIRPAP1-201ENST00000448467 1770 ntBASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HS3ST4Q9Y661 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 AC132008.2-207ENST00000454517 770 ntBASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 AC111152.3-201ENST00000569699 673 ntBASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HS3ST4Q9Y661 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HS3ST4Q9Y661 AL133373.2-201ENST00000623187 2828 ntBASIC18.27■□□□□ 0.52
HS3ST4Q9Y661 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HS3ST4Q9Y661 REXO1L11P-201ENST00000620964 1927 ntBASIC18.27■□□□□ 0.52
HS3ST4Q9Y661 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
HS3ST4Q9Y661 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HS3ST4Q9Y661 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HS3ST4Q9Y661 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
HS3ST4Q9Y661 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.27■□□□□ 0.52
HS3ST4Q9Y661 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HS3ST4Q9Y661 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HS3ST4Q9Y661 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.27■□□□□ 0.52
HS3ST4Q9Y661 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HS3ST4Q9Y661 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.27■□□□□ 0.52
HS3ST4Q9Y661 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.27■□□□□ 0.52
HS3ST4Q9Y661 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.27■□□□□ 0.52
HS3ST4Q9Y661 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.27■□□□□ 0.52
HS3ST4Q9Y661 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HS3ST4Q9Y661 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.27■□□□□ 0.51
HS3ST4Q9Y661 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.27■□□□□ 0.51
HS3ST4Q9Y661 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
HS3ST4Q9Y661 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
HS3ST4Q9Y661 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.27■□□□□ 0.51
HS3ST4Q9Y661 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
HS3ST4Q9Y661 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HS3ST4Q9Y661 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HS3ST4Q9Y661 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 AC068880.1-201ENST00000507289 2297 ntBASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 AKR1C7P-201ENST00000305623 895 ntBASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.26■□□□□ 0.51
HS3ST4Q9Y661 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms