Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 LETM1P2-201ENST00000597330 2178 ntBASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX9Q9Y5X1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 AC004870.1-201ENST00000315132 882 ntBASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 FAM220CP-201ENST00000395253 831 ntBASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 TPM4P1-201ENST00000436100 807 ntBASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 AC132008.2-207ENST00000454517 770 ntBASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNX9Q9Y5X1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
SNX9Q9Y5X1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNX9Q9Y5X1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNX9Q9Y5X1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNX9Q9Y5X1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.02■□□□□ 0.63
SNX9Q9Y5X1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 AKR1C7P-201ENST00000305623 895 ntBASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX9Q9Y5X1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms