Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 ABCD1P5-201ENST00000445663 754 ntBASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PCDHB2Q9Y5E7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 AP005117.1-201ENST00000584346 1413 ntBASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 AL031284.1-201ENST00000419297 478 ntBASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 RNPS1P1-201ENST00000507437 918 ntBASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB2Q9Y5E7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 AL590627.1-203ENST00000421194 1026 ntBASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 AC120114.3-201ENST00000611923 658 ntBASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 BX640515.1-201ENST00000617215 977 ntBASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 AC097374.2-201ENST00000618617 1306 ntBASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB2Q9Y5E7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms