Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP4S1Q9Y587 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.29
AP4S1Q9Y587 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
AP4S1Q9Y587 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
AP4S1Q9Y587 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 AC008040.2-201ENST00000461049 708 ntBASIC16.83■□□□□ 0.28
AP4S1Q9Y587 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP4S1Q9Y587 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 AL603756.1-201ENST00000606511 2163 ntBASIC16.82■□□□□ 0.28
AP4S1Q9Y587 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 AL024508.2-201ENST00000607749 1894 ntBASIC16.82■□□□□ 0.28
AP4S1Q9Y587 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 AC008741.2-201ENST00000612792 3115 ntBASIC16.82■□□□□ 0.28
AP4S1Q9Y587 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 FAM207BP-201ENST00000447172 505 ntBASIC16.82■□□□□ 0.28
AP4S1Q9Y587 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 AL162430.1-201ENST00000480705 870 ntBASIC16.82■□□□□ 0.28
AP4S1Q9Y587 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.82■□□□□ 0.28
AP4S1Q9Y587 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP4S1Q9Y587 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP4S1Q9Y587 AC006970.2-201ENST00000450065 779 ntBASIC16.81■□□□□ 0.28
AP4S1Q9Y587 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms