Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SALL4Q9UJQ4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.9■□□□□ 0.62
SALL4Q9UJQ4 AC113404.2-201ENST00000507884 177 ntBASIC18.9■□□□□ 0.62
SALL4Q9UJQ4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SALL4Q9UJQ4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.9■□□□□ 0.62
SALL4Q9UJQ4 NEK4P2-201ENST00000580004 1012 ntBASIC18.9■□□□□ 0.62
SALL4Q9UJQ4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.9■□□□□ 0.62
SALL4Q9UJQ4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SALL4Q9UJQ4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SALL4Q9UJQ4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SALL4Q9UJQ4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SALL4Q9UJQ4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SALL4Q9UJQ4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SALL4Q9UJQ4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SALL4Q9UJQ4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SALL4Q9UJQ4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SALL4Q9UJQ4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.9■□□□□ 0.62
SALL4Q9UJQ4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SALL4Q9UJQ4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SALL4Q9UJQ4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SALL4Q9UJQ4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SALL4Q9UJQ4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.89■□□□□ 0.61
SALL4Q9UJQ4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.89■□□□□ 0.61
SALL4Q9UJQ4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SALL4Q9UJQ4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SALL4Q9UJQ4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SALL4Q9UJQ4 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.89■□□□□ 0.61
SALL4Q9UJQ4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.89■□□□□ 0.61
SALL4Q9UJQ4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.89■□□□□ 0.61
SALL4Q9UJQ4 UBALD1-205ENST00000590891 2641 ntBASIC18.89■□□□□ 0.61
SALL4Q9UJQ4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SALL4Q9UJQ4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SALL4Q9UJQ4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SALL4Q9UJQ4 AGGF1P2-201ENST00000426656 2106 ntBASIC18.89■□□□□ 0.61
SALL4Q9UJQ4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SALL4Q9UJQ4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.89■□□□□ 0.61
SALL4Q9UJQ4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SALL4Q9UJQ4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SALL4Q9UJQ4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SALL4Q9UJQ4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 LINC01238-205ENST00000567549 1107 ntBASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SALL4Q9UJQ4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 AK4P3-201ENST00000418260 669 ntBASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 AC087388.1-201ENST00000571370 1112 ntBASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.87■□□□□ 0.61
SALL4Q9UJQ4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.86■□□□□ 0.61
SALL4Q9UJQ4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SALL4Q9UJQ4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SALL4Q9UJQ4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SALL4Q9UJQ4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SALL4Q9UJQ4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SALL4Q9UJQ4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.86■□□□□ 0.61
SALL4Q9UJQ4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SALL4Q9UJQ4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms