Protein–RNA interactions for Protein: Q9UJ99

CDH22, Cadherin-22, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH22Q9UJ99 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH22Q9UJ99 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH22Q9UJ99 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CDH22Q9UJ99 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.82■□□□□ 0.6
CDH22Q9UJ99 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.82■□□□□ 0.6
CDH22Q9UJ99 AL139288.1-201ENST00000623748 933 ntBASIC18.82■□□□□ 0.6
CDH22Q9UJ99 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.82■□□□□ 0.6
CDH22Q9UJ99 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH22Q9UJ99 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH22Q9UJ99 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH22Q9UJ99 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDH22Q9UJ99 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDH22Q9UJ99 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH22Q9UJ99 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CDH22Q9UJ99 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDH22Q9UJ99 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CDH22Q9UJ99 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH22Q9UJ99 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDH22Q9UJ99 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH22Q9UJ99 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH22Q9UJ99 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 RNA5SP416-201ENST00000516838 111 ntBASIC18.81■□□□□ 0.6
CDH22Q9UJ99 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH22Q9UJ99 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 AC083906.6-201ENST00000641366 219 ntBASIC18.8■□□□□ 0.6
CDH22Q9UJ99 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH22Q9UJ99 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 AC090164.3-201ENST00000610780 2143 ntBASIC18.79■□□□□ 0.6
CDH22Q9UJ99 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 AC004832.2-201ENST00000426397 482 ntBASIC18.79■□□□□ 0.6
CDH22Q9UJ99 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 DNAJB3-201ENST00000446806 729 ntBASIC18.79■□□□□ 0.6
CDH22Q9UJ99 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 AL596442.2-201ENST00000610240 980 ntBASIC18.79■□□□□ 0.6
CDH22Q9UJ99 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.79■□□□□ 0.6
CDH22Q9UJ99 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms