Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 CIPC-205ENST00000555437 566 ntTSL 3 BASIC25.41■■□□□ 1.66
STAG3Q9UJ98 RIN3-211ENST00000557762 517 ntTSL 3 BASIC25.41■■□□□ 1.66
STAG3Q9UJ98 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC25.41■■□□□ 1.66
STAG3Q9UJ98 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
STAG3Q9UJ98 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
STAG3Q9UJ98 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
STAG3Q9UJ98 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
STAG3Q9UJ98 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC25.41■■□□□ 1.66
STAG3Q9UJ98 AC093010.1-201ENST00000473625 1624 ntBASIC25.41■■□□□ 1.66
STAG3Q9UJ98 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
STAG3Q9UJ98 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
STAG3Q9UJ98 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
STAG3Q9UJ98 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
STAG3Q9UJ98 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
STAG3Q9UJ98 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
STAG3Q9UJ98 PTCHD3P3-201ENST00000403073 906 ntBASIC25.4■■□□□ 1.66
STAG3Q9UJ98 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
STAG3Q9UJ98 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC25.4■■□□□ 1.66
STAG3Q9UJ98 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC25.4■■□□□ 1.66
STAG3Q9UJ98 RNF34-208ENST00000555076 593 ntTSL 3 BASIC25.4■■□□□ 1.66
STAG3Q9UJ98 AC239800.4-201ENST00000603712 296 ntBASIC25.4■■□□□ 1.66
STAG3Q9UJ98 AC093512.1-201ENST00000617969 520 ntBASIC25.4■■□□□ 1.66
STAG3Q9UJ98 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
STAG3Q9UJ98 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
STAG3Q9UJ98 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
STAG3Q9UJ98 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC25.39■■□□□ 1.66
STAG3Q9UJ98 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
STAG3Q9UJ98 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
STAG3Q9UJ98 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC25.39■■□□□ 1.66
STAG3Q9UJ98 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
STAG3Q9UJ98 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
STAG3Q9UJ98 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC25.39■■□□□ 1.66
STAG3Q9UJ98 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC25.39■■□□□ 1.66
STAG3Q9UJ98 COX20P2-201ENST00000452636 358 ntBASIC25.39■■□□□ 1.66
STAG3Q9UJ98 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
STAG3Q9UJ98 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC25.39■■□□□ 1.66
STAG3Q9UJ98 TK1-204ENST00000590430 683 ntTSL 3 BASIC25.39■■□□□ 1.66
STAG3Q9UJ98 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC25.39■■□□□ 1.66
STAG3Q9UJ98 AC004835.2-201ENST00000603762 682 ntBASIC25.39■■□□□ 1.66
STAG3Q9UJ98 AC007064.4-201ENST00000637740 555 ntBASIC25.39■■□□□ 1.66
STAG3Q9UJ98 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
STAG3Q9UJ98 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.65
STAG3Q9UJ98 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.65
STAG3Q9UJ98 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
STAG3Q9UJ98 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
STAG3Q9UJ98 PHGDH-209ENST00000641074 1780 ntBASIC25.39■■□□□ 1.65
STAG3Q9UJ98 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC25.38■■□□□ 1.65
STAG3Q9UJ98 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
STAG3Q9UJ98 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC25.38■■□□□ 1.65
STAG3Q9UJ98 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
STAG3Q9UJ98 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
STAG3Q9UJ98 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
STAG3Q9UJ98 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC25.38■■□□□ 1.65
STAG3Q9UJ98 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC25.38■■□□□ 1.65
STAG3Q9UJ98 GGTLC5P-201ENST00000617623 998 ntBASIC25.38■■□□□ 1.65
STAG3Q9UJ98 AC091812.2-201ENST00000619081 385 ntBASIC25.38■■□□□ 1.65
STAG3Q9UJ98 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
STAG3Q9UJ98 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC25.38■■□□□ 1.65
STAG3Q9UJ98 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
STAG3Q9UJ98 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
STAG3Q9UJ98 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
STAG3Q9UJ98 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
STAG3Q9UJ98 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
STAG3Q9UJ98 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
STAG3Q9UJ98 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC25.38■■□□□ 1.65
STAG3Q9UJ98 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 CD99-202ENST00000381180 530 ntTSL 2 BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 RHOQP3-201ENST00000437982 621 ntBASIC25.37■■□□□ 1.65
STAG3Q9UJ98 BCRP1-201ENST00000444246 691 ntBASIC25.37■■□□□ 1.65
STAG3Q9UJ98 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 DUTP2-201ENST00000519164 463 ntBASIC25.37■■□□□ 1.65
STAG3Q9UJ98 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 AC109462.3-201ENST00000573934 613 ntBASIC25.37■■□□□ 1.65
STAG3Q9UJ98 AC023141.13-201ENST00000604991 943 ntBASIC25.37■■□□□ 1.65
STAG3Q9UJ98 AL096865.1-201ENST00000606796 927 ntBASIC25.37■■□□□ 1.65
STAG3Q9UJ98 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
STAG3Q9UJ98 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
STAG3Q9UJ98 AC097637.2-201ENST00000624096 1997 ntBASIC25.36■■□□□ 1.65
STAG3Q9UJ98 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
STAG3Q9UJ98 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms