Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 AL163051.1-201ENST00000569214 1512 ntBASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 MIR149-201ENST00000384879 89 ntBASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 AC097658.1-201ENST00000475555 843 ntBASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 AC131212.4-201ENST00000623606 975 ntBASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 HLA-J-201ENST00000462773 1622 ntBASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COMMD3Q9UBI1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 LINC01126-201ENST00000623515 1646 ntBASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 AC060834.1-201ENST00000443027 2032 ntBASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
COMMD3Q9UBI1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms