Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 LINC00304-203ENST00000565008 1864 ntBASIC17.26■□□□□ 0.35
NDE1Q9NXR1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NDE1Q9NXR1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 AL353708.3-201ENST00000610272 989 ntBASIC17.25■□□□□ 0.35
NDE1Q9NXR1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.25■□□□□ 0.35
NDE1Q9NXR1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.25■□□□□ 0.35
NDE1Q9NXR1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 AC022898.2-201ENST00000616822 1312 ntBASIC17.24■□□□□ 0.35
NDE1Q9NXR1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 GPAT2P1-201ENST00000444924 1672 ntBASIC17.24■□□□□ 0.35
NDE1Q9NXR1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 AC239809.2-201ENST00000415381 517 ntBASIC17.24■□□□□ 0.35
NDE1Q9NXR1 KRT17P3-201ENST00000420566 1262 ntBASIC17.24■□□□□ 0.35
NDE1Q9NXR1 AP002982.1-201ENST00000492365 877 ntBASIC17.24■□□□□ 0.35
NDE1Q9NXR1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 MIR3180-5-201ENST00000583743 153 ntBASIC17.24■□□□□ 0.35
NDE1Q9NXR1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 MIR5787-201ENST00000611784 55 ntBASIC17.24■□□□□ 0.35
NDE1Q9NXR1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.24■□□□□ 0.35
NDE1Q9NXR1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 KRT8P7-201ENST00000533003 1432 ntBASIC17.23■□□□□ 0.35
NDE1Q9NXR1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 PKD1P5-201ENST00000532415 10291 ntBASIC17.23■□□□□ 0.35
NDE1Q9NXR1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 LINC01126-201ENST00000623515 1646 ntBASIC17.23■□□□□ 0.35
NDE1Q9NXR1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 RARRES2P6-201ENST00000567333 442 ntBASIC17.23■□□□□ 0.35
NDE1Q9NXR1 LINC01451-201ENST00000623792 534 ntBASIC17.23■□□□□ 0.35
NDE1Q9NXR1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
NDE1Q9NXR1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms