Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 KRT18P48-201ENST00000434763 852 ntBASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UPF3BQ9BZI7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 CROCCP2-202ENST00000412962 2773 ntBASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UPF3BQ9BZI7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 TSPY5P-201ENST00000426936 936 ntBASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 VENTXP5-201ENST00000523979 775 ntBASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
UPF3BQ9BZI7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
UPF3BQ9BZI7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UPF3BQ9BZI7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UPF3BQ9BZI7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
UPF3BQ9BZI7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC21.2■□□□□ 0.98
UPF3BQ9BZI7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
UPF3BQ9BZI7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
UPF3BQ9BZI7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
UPF3BQ9BZI7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UPF3BQ9BZI7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
UPF3BQ9BZI7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.2■□□□□ 0.98
UPF3BQ9BZI7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
UPF3BQ9BZI7 HYMAI.1-201ENST00000620949 238 ntBASIC21.2■□□□□ 0.98
UPF3BQ9BZI7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
UPF3BQ9BZI7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.2■□□□□ 0.98
UPF3BQ9BZI7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
UPF3BQ9BZI7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
UPF3BQ9BZI7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
UPF3BQ9BZI7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
UPF3BQ9BZI7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
UPF3BQ9BZI7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPF3BQ9BZI7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms