Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.62■□□□□ 0.41
HDAC8Q9BY41 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC8Q9BY41 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC8Q9BY41 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC8Q9BY41 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC8Q9BY41 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC8Q9BY41 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.62■□□□□ 0.41
HDAC8Q9BY41 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC8Q9BY41 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.62■□□□□ 0.41
HDAC8Q9BY41 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HDAC8Q9BY41 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC8Q9BY41 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC8Q9BY41 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC8Q9BY41 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC8Q9BY41 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC8Q9BY41 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.62■□□□□ 0.41
HDAC8Q9BY41 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC8Q9BY41 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 MYCLP1-201ENST00000372451 1075 ntBASIC17.61■□□□□ 0.41
HDAC8Q9BY41 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 AC005104.2-201ENST00000427818 678 ntBASIC17.61■□□□□ 0.41
HDAC8Q9BY41 IGHV3-22-201ENST00000520721 359 ntBASIC17.61■□□□□ 0.41
HDAC8Q9BY41 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 AC004817.3-201ENST00000602957 2129 ntBASIC17.61■□□□□ 0.41
HDAC8Q9BY41 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 AL589182.2-201ENST00000619332 1049 ntBASIC17.61■□□□□ 0.41
HDAC8Q9BY41 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC8Q9BY41 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 SIGLEC30P-201ENST00000455569 941 ntBASIC17.6■□□□□ 0.41
HDAC8Q9BY41 RPL13AP23-201ENST00000480739 586 ntBASIC17.6■□□□□ 0.41
HDAC8Q9BY41 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 AC106730.1-201ENST00000566722 1090 ntBASIC17.6■□□□□ 0.41
HDAC8Q9BY41 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.6■□□□□ 0.41
HDAC8Q9BY41 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms