Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
UPK3BQ9BT76 LTF-203ENST00000426532 2494 ntTSL 2 BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 AC124067.4-201ENST00000519691 2379 ntBASIC12.4□□□□□ -0.42
UPK3BQ9BT76 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 KRT18P65-201ENST00000439811 1286 ntBASIC12.4□□□□□ -0.42
UPK3BQ9BT76 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 AP000867.3-201ENST00000524675 377 ntBASIC12.4□□□□□ -0.42
UPK3BQ9BT76 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 AL121772.3-201ENST00000610840 674 ntBASIC12.4□□□□□ -0.42
UPK3BQ9BT76 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.4□□□□□ -0.42
UPK3BQ9BT76 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 CROCCP3-202ENST00000420820 1947 ntBASIC12.4□□□□□ -0.42
UPK3BQ9BT76 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UPK3BQ9BT76 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
UPK3BQ9BT76 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
UPK3BQ9BT76 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
UPK3BQ9BT76 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
UPK3BQ9BT76 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC12.4□□□□□ -0.43
UPK3BQ9BT76 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC12.4□□□□□ -0.43
UPK3BQ9BT76 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 MST1L-201ENST00000442552 2185 ntBASIC12.39□□□□□ -0.43
UPK3BQ9BT76 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 KRT17P6-201ENST00000453795 1220 ntBASIC12.39□□□□□ -0.43
UPK3BQ9BT76 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 AC111152.3-201ENST00000569699 673 ntBASIC12.39□□□□□ -0.43
UPK3BQ9BT76 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms