Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.83■□□□□ 0.28
TUBA1CQ9BQE3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
TUBA1CQ9BQE3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.83■□□□□ 0.28
TUBA1CQ9BQE3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBA1CQ9BQE3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.83■□□□□ 0.28
TUBA1CQ9BQE3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBA1CQ9BQE3 MIR3180-5-201ENST00000583743 153 ntBASIC16.83■□□□□ 0.28
TUBA1CQ9BQE3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TUBA1CQ9BQE3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TUBA1CQ9BQE3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.83■□□□□ 0.28
TUBA1CQ9BQE3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TUBA1CQ9BQE3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TUBA1CQ9BQE3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBA1CQ9BQE3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 MTMR9LP-203ENST00000426597 1545 ntBASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 AC008556.1-201ENST00000610908 2040 ntBASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBA1CQ9BQE3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 RCC2P3-201ENST00000418112 1537 ntBASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 AL031133.1-201ENST00000406807 723 ntBASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 KRT18P38-201ENST00000449496 1282 ntBASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBA1CQ9BQE3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms