Protein–RNA interactions for Protein: Q99707

MTR, Methionine synthase, humanhuman

Predictions only

Length 1,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTRQ99707 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MTRQ99707 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MTRQ99707 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MTRQ99707 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MTRQ99707 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
MTRQ99707 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MTRQ99707 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MTRQ99707 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MTRQ99707 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MTRQ99707 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MTRQ99707 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MTRQ99707 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
MTRQ99707 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MTRQ99707 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MTRQ99707 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MTRQ99707 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
MTRQ99707 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MTRQ99707 VENTXP7-201ENST00000475503 772 ntBASIC20.03■□□□□ 0.8
MTRQ99707 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.03■□□□□ 0.8
MTRQ99707 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MTRQ99707 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.03■□□□□ 0.8
MTRQ99707 AC012615.1-201ENST00000565797 1299 ntBASIC20.03■□□□□ 0.8
MTRQ99707 AC011840.4-201ENST00000578471 627 ntBASIC20.03■□□□□ 0.8
MTRQ99707 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.03■□□□□ 0.8
MTRQ99707 AC009154.2-201ENST00000621177 724 ntBASIC20.03■□□□□ 0.8
MTRQ99707 AC012313.10-201ENST00000623509 926 ntBASIC20.03■□□□□ 0.8
MTRQ99707 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.03■□□□□ 0.8
MTRQ99707 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.03■□□□□ 0.8
MTRQ99707 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MTRQ99707 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MTRQ99707 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MTRQ99707 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.03■□□□□ 0.8
MTRQ99707 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
MTRQ99707 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MTRQ99707 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.02■□□□□ 0.8
MTRQ99707 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
MTRQ99707 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MTRQ99707 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.02■□□□□ 0.8
MTRQ99707 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
MTRQ99707 REXO1L11P-201ENST00000620964 1927 ntBASIC20.02■□□□□ 0.8
MTRQ99707 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MTRQ99707 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MTRQ99707 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MTRQ99707 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MTRQ99707 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MTRQ99707 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MTRQ99707 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MTRQ99707 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MTRQ99707 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MTRQ99707 AC246785.2-201ENST00000432512 513 ntBASIC20.02■□□□□ 0.8
MTRQ99707 DUSP5P1-201ENST00000441325 1139 ntBASIC20.02■□□□□ 0.8
MTRQ99707 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.02■□□□□ 0.8
MTRQ99707 PRELID1P1-202ENST00000567272 903 ntBASIC20.02■□□□□ 0.8
MTRQ99707 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.02■□□□□ 0.8
MTRQ99707 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
MTRQ99707 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MTRQ99707 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MTRQ99707 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
MTRQ99707 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
MTRQ99707 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.02■□□□□ 0.79
MTRQ99707 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.02■□□□□ 0.79
MTRQ99707 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.02■□□□□ 0.79
MTRQ99707 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
MTRQ99707 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
MTRQ99707 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MTRQ99707 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MTRQ99707 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.01■□□□□ 0.79
MTRQ99707 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.01■□□□□ 0.79
MTRQ99707 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.01■□□□□ 0.79
MTRQ99707 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
MTRQ99707 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.01■□□□□ 0.79
MTRQ99707 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.01■□□□□ 0.79
MTRQ99707 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.01■□□□□ 0.79
MTRQ99707 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
MTRQ99707 FZD10-202ENST00000539839 3282 ntBASIC20.01■□□□□ 0.79
MTRQ99707 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.01■□□□□ 0.79
MTRQ99707 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
MTRQ99707 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MTRQ99707 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.01■□□□□ 0.79
MTRQ99707 AL845331.1-201ENST00000424978 1190 ntBASIC20.01■□□□□ 0.79
MTRQ99707 AC068472.1-201ENST00000474589 881 ntBASIC20.01■□□□□ 0.79
MTRQ99707 AC104819.1-201ENST00000504587 486 ntBASIC20.01■□□□□ 0.79
MTRQ99707 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.01■□□□□ 0.79
MTRQ99707 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.01■□□□□ 0.79
MTRQ99707 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MTRQ99707 AC074051.2-201ENST00000565115 352 ntBASIC20.01■□□□□ 0.79
MTRQ99707 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.01■□□□□ 0.79
MTRQ99707 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MTRQ99707 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MTRQ99707 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
MTRQ99707 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MTRQ99707 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.01■□□□□ 0.79
MTRQ99707 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MTRQ99707 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MTRQ99707 AC022898.2-201ENST00000616822 1312 ntBASIC20.01■□□□□ 0.79
MTRQ99707 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
MTRQ99707 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MTRQ99707 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MTRQ99707 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20■□□□□ 0.79
MTRQ99707 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms