Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 AC004461.1-201ENST00000412461 403 ntBASIC25.34■■□□□ 1.65
SCAF11Q99590 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC25.34■■□□□ 1.65
SCAF11Q99590 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC25.34■■□□□ 1.65
SCAF11Q99590 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC25.34■■□□□ 1.65
SCAF11Q99590 AC004835.2-201ENST00000603762 682 ntBASIC25.34■■□□□ 1.65
SCAF11Q99590 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
SCAF11Q99590 AC092902.6-201ENST00000641783 218 ntBASIC25.34■■□□□ 1.65
SCAF11Q99590 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SCAF11Q99590 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SCAF11Q99590 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
SCAF11Q99590 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SCAF11Q99590 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
SCAF11Q99590 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SCAF11Q99590 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SCAF11Q99590 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SCAF11Q99590 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SCAF11Q99590 AC132938.5-201ENST00000624980 1813 ntBASIC25.33■■□□□ 1.65
SCAF11Q99590 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SCAF11Q99590 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC25.33■■□□□ 1.65
SCAF11Q99590 KLF4P1-201ENST00000412782 1185 ntBASIC25.33■■□□□ 1.65
SCAF11Q99590 AC103564.2-201ENST00000432853 1299 ntBASIC25.33■■□□□ 1.65
SCAF11Q99590 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC25.33■■□□□ 1.65
SCAF11Q99590 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC25.33■■□□□ 1.64
SCAF11Q99590 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
SCAF11Q99590 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
SCAF11Q99590 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
SCAF11Q99590 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.64
SCAF11Q99590 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
SCAF11Q99590 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF11Q99590 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF11Q99590 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF11Q99590 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF11Q99590 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF11Q99590 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF11Q99590 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF11Q99590 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF11Q99590 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
SCAF11Q99590 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF11Q99590 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC25.32■■□□□ 1.64
SCAF11Q99590 AC109322.1-201ENST00000524499 1264 ntBASIC25.32■■□□□ 1.64
SCAF11Q99590 OR7E47P-204ENST00000575924 449 ntBASIC25.32■■□□□ 1.64
SCAF11Q99590 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
SCAF11Q99590 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
SCAF11Q99590 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF11Q99590 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF11Q99590 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF11Q99590 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC25.32■■□□□ 1.64
SCAF11Q99590 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF11Q99590 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SCAF11Q99590 AL138781.2-201ENST00000617896 1843 ntBASIC25.32■■□□□ 1.64
SCAF11Q99590 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCAF11Q99590 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
SCAF11Q99590 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
SCAF11Q99590 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
SCAF11Q99590 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCAF11Q99590 GID4-202ENST00000376345 1391 ntTSL 3 BASIC25.31■■□□□ 1.64
SCAF11Q99590 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC25.31■■□□□ 1.64
SCAF11Q99590 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCAF11Q99590 AC023141.5-201ENST00000458585 616 ntBASIC25.31■■□□□ 1.64
SCAF11Q99590 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC25.31■■□□□ 1.64
SCAF11Q99590 S100A2-206ENST00000497140 697 ntTSL 2 BASIC25.31■■□□□ 1.64
SCAF11Q99590 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC25.31■■□□□ 1.64
SCAF11Q99590 MIR4745-201ENST00000577608 62 ntBASIC25.31■■□□□ 1.64
SCAF11Q99590 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC25.31■■□□□ 1.64
SCAF11Q99590 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
SCAF11Q99590 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
SCAF11Q99590 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCAF11Q99590 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCAF11Q99590 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC25.31■■□□□ 1.64
SCAF11Q99590 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SCAF11Q99590 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
SCAF11Q99590 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC25.31■■□□□ 1.64
SCAF11Q99590 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
SCAF11Q99590 USP49-202ENST00000373010 2446 ntTSL 5 BASIC25.31■■□□□ 1.64
SCAF11Q99590 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SCAF11Q99590 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SCAF11Q99590 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC25.3■■□□□ 1.64
SCAF11Q99590 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SCAF11Q99590 ADH5P3-201ENST00000433842 1137 ntBASIC25.3■■□□□ 1.64
SCAF11Q99590 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC25.3■■□□□ 1.64
SCAF11Q99590 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC25.3■■□□□ 1.64
SCAF11Q99590 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC25.3■■□□□ 1.64
SCAF11Q99590 INO80C-206ENST00000586489 594 ntTSL 3 BASIC25.3■■□□□ 1.64
SCAF11Q99590 AC022145.2-201ENST00000598203 171 ntBASIC25.3■■□□□ 1.64
SCAF11Q99590 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC25.3■■□□□ 1.64
SCAF11Q99590 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SCAF11Q99590 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SCAF11Q99590 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SCAF11Q99590 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC25.29■■□□□ 1.64
SCAF11Q99590 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SCAF11Q99590 COPE-202ENST00000349893 948 ntTSL 2 BASIC25.29■■□□□ 1.64
SCAF11Q99590 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SCAF11Q99590 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC25.29■■□□□ 1.64
SCAF11Q99590 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC25.29■■□□□ 1.64
SCAF11Q99590 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC25.29■■□□□ 1.64
SCAF11Q99590 CCDC74BP1-201ENST00000508880 1123 ntBASIC25.29■■□□□ 1.64
SCAF11Q99590 PUDP-206ENST00000540122 825 ntTSL 2 BASIC25.29■■□□□ 1.64
SCAF11Q99590 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
SCAF11Q99590 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC25.29■■□□□ 1.64
SCAF11Q99590 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms