Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.41■□□□□ 0.54
HAPLN3Q96S86 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.41■□□□□ 0.54
HAPLN3Q96S86 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.41■□□□□ 0.54
HAPLN3Q96S86 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.41■□□□□ 0.54
HAPLN3Q96S86 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HAPLN3Q96S86 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HAPLN3Q96S86 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HAPLN3Q96S86 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.41■□□□□ 0.54
HAPLN3Q96S86 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.41■□□□□ 0.54
HAPLN3Q96S86 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.41■□□□□ 0.54
HAPLN3Q96S86 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.41■□□□□ 0.54
HAPLN3Q96S86 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HAPLN3Q96S86 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HAPLN3Q96S86 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HAPLN3Q96S86 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HAPLN3Q96S86 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HAPLN3Q96S86 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HAPLN3Q96S86 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HAPLN3Q96S86 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 POM121L3P-201ENST00000419331 1163 ntBASIC18.4■□□□□ 0.54
HAPLN3Q96S86 NUS1P1-201ENST00000446295 882 ntBASIC18.4■□□□□ 0.54
HAPLN3Q96S86 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 MIR3652-201ENST00000579335 131 ntBASIC18.4■□□□□ 0.54
HAPLN3Q96S86 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.4■□□□□ 0.54
HAPLN3Q96S86 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
HAPLN3Q96S86 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HAPLN3Q96S86 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
HAPLN3Q96S86 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
HAPLN3Q96S86 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.39■□□□□ 0.54
HAPLN3Q96S86 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
HAPLN3Q96S86 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HAPLN3Q96S86 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
HAPLN3Q96S86 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.39■□□□□ 0.54
HAPLN3Q96S86 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.39■□□□□ 0.54
HAPLN3Q96S86 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HAPLN3Q96S86 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HAPLN3Q96S86 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 AC010460.3-201ENST00000511359 1579 ntBASIC18.39■□□□□ 0.53
HAPLN3Q96S86 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 COX5BP2-201ENST00000392354 334 ntBASIC18.39■□□□□ 0.53
HAPLN3Q96S86 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 AC007967.3-201ENST00000434308 558 ntBASIC18.39■□□□□ 0.53
HAPLN3Q96S86 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HAPLN3Q96S86 BX276092.7-203ENST00000637198 1536 ntBASIC18.39■□□□□ 0.53
HAPLN3Q96S86 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.38■□□□□ 0.53
HAPLN3Q96S86 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.38■□□□□ 0.53
HAPLN3Q96S86 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HAPLN3Q96S86 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HAPLN3Q96S86 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HAPLN3Q96S86 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HAPLN3Q96S86 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HAPLN3Q96S86 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HAPLN3Q96S86 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms