Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC092580.3-201ENST00000430932 139 ntBASIC29.17■■■□□ 2.26
IFT140Q96RY7 RBPMS2P1-201ENST00000437762 623 ntBASIC29.17■■■□□ 2.26
IFT140Q96RY7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
IFT140Q96RY7 IGHV3-42-201ENST00000520410 361 ntBASIC29.17■■■□□ 2.26
IFT140Q96RY7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC29.17■■■□□ 2.26
IFT140Q96RY7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
IFT140Q96RY7 AKAP8P1-201ENST00000434743 1349 ntBASIC29.17■■■□□ 2.26
IFT140Q96RY7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC29.17■■■□□ 2.26
IFT140Q96RY7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC29.17■■■□□ 2.26
IFT140Q96RY7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
IFT140Q96RY7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
IFT140Q96RY7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC29.17■■■□□ 2.26
IFT140Q96RY7 AC008677.1-201ENST00000519230 1561 ntBASIC29.17■■■□□ 2.26
IFT140Q96RY7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
IFT140Q96RY7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC29.17■■■□□ 2.26
IFT140Q96RY7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC29.17■■■□□ 2.26
IFT140Q96RY7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC29.17■■■□□ 2.26
IFT140Q96RY7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC29.17■■■□□ 2.26
IFT140Q96RY7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC29.17■■■□□ 2.26
IFT140Q96RY7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC29.17■■■□□ 2.26
IFT140Q96RY7 AC084121.4-201ENST00000641598 221 ntBASIC29.17■■■□□ 2.26
IFT140Q96RY7 AF228730.8-201ENST00000642140 221 ntBASIC29.17■■■□□ 2.26
IFT140Q96RY7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
IFT140Q96RY7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC29.16■■■□□ 2.26
IFT140Q96RY7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC29.16■■■□□ 2.26
IFT140Q96RY7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC29.16■■■□□ 2.26
IFT140Q96RY7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
IFT140Q96RY7 CALY-202ENST00000368555 783 ntTSL 2 BASIC29.16■■■□□ 2.26
IFT140Q96RY7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
IFT140Q96RY7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC29.16■■■□□ 2.26
IFT140Q96RY7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
IFT140Q96RY7 SPCS2P4-201ENST00000436160 681 ntBASIC29.16■■■□□ 2.26
IFT140Q96RY7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC29.16■■■□□ 2.26
IFT140Q96RY7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC29.16■■■□□ 2.26
IFT140Q96RY7 SLC25A6P2-201ENST00000497974 877 ntBASIC29.16■■■□□ 2.26
IFT140Q96RY7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC29.16■■■□□ 2.26
IFT140Q96RY7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC29.16■■■□□ 2.26
IFT140Q96RY7 AC026150.2-201ENST00000564693 1156 ntBASIC29.16■■■□□ 2.26
IFT140Q96RY7 AC027307.3-201ENST00000594262 1100 ntBASIC29.16■■■□□ 2.26
IFT140Q96RY7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC29.16■■■□□ 2.26
IFT140Q96RY7 AL662799.1-202ENST00000614205 422 ntBASIC29.16■■■□□ 2.26
IFT140Q96RY7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC29.16■■■□□ 2.26
IFT140Q96RY7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
IFT140Q96RY7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
IFT140Q96RY7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC29.15■■■□□ 2.26
IFT140Q96RY7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
IFT140Q96RY7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC29.15■■■□□ 2.26
IFT140Q96RY7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
IFT140Q96RY7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
IFT140Q96RY7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC29.15■■■□□ 2.26
IFT140Q96RY7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC29.15■■■□□ 2.26
IFT140Q96RY7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC29.15■■■□□ 2.26
IFT140Q96RY7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
IFT140Q96RY7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
IFT140Q96RY7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC29.14■■■□□ 2.26
IFT140Q96RY7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
IFT140Q96RY7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC29.14■■■□□ 2.26
IFT140Q96RY7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC29.14■■■□□ 2.26
IFT140Q96RY7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
IFT140Q96RY7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC29.14■■■□□ 2.26
IFT140Q96RY7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
IFT140Q96RY7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
IFT140Q96RY7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC29.14■■■□□ 2.26
IFT140Q96RY7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.26
IFT140Q96RY7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC29.14■■■□□ 2.26
IFT140Q96RY7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC29.14■■■□□ 2.26
IFT140Q96RY7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC29.14■■■□□ 2.26
IFT140Q96RY7 ATP5G2P4-201ENST00000442175 420 ntBASIC29.14■■■□□ 2.26
IFT140Q96RY7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC29.14■■■□□ 2.26
IFT140Q96RY7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
IFT140Q96RY7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
IFT140Q96RY7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC29.14■■■□□ 2.25
IFT140Q96RY7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.25
IFT140Q96RY7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.25
IFT140Q96RY7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC29.14■■■□□ 2.25
IFT140Q96RY7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
IFT140Q96RY7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
IFT140Q96RY7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
IFT140Q96RY7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
IFT140Q96RY7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
IFT140Q96RY7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
IFT140Q96RY7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC29.13■■■□□ 2.25
IFT140Q96RY7 ARSEP1-201ENST00000420443 635 ntBASIC29.13■■■□□ 2.25
IFT140Q96RY7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC29.13■■■□□ 2.25
IFT140Q96RY7 AC004890.2-204ENST00000481968 304 ntBASIC29.13■■■□□ 2.25
IFT140Q96RY7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC29.13■■■□□ 2.25
IFT140Q96RY7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC29.13■■■□□ 2.25
IFT140Q96RY7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC29.13■■■□□ 2.25
IFT140Q96RY7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
IFT140Q96RY7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC29.12■■■□□ 2.25
IFT140Q96RY7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC29.12■■■□□ 2.25
IFT140Q96RY7 U91328.1-201ENST00000437528 223 ntBASIC29.12■■■□□ 2.25
IFT140Q96RY7 AC069120.2-201ENST00000524091 540 ntBASIC29.12■■■□□ 2.25
IFT140Q96RY7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
IFT140Q96RY7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC29.12■■■□□ 2.25
IFT140Q96RY7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC29.12■■■□□ 2.25
IFT140Q96RY7 AC093484.2-201ENST00000580996 2166 ntBASIC29.12■■■□□ 2.25
IFT140Q96RY7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
IFT140Q96RY7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
IFT140Q96RY7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms