Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 SIRPAP1-201ENST00000448467 1770 ntBASIC5.35□□□□□ -1.55
HMCN1Q96RW7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 GPAA1P2-201ENST00000417923 928 ntBASIC5.35□□□□□ -1.55
HMCN1Q96RW7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 RN7SL818P-201ENST00000485099 259 ntBASIC5.35□□□□□ -1.55
HMCN1Q96RW7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 RN7SL725P-201ENST00000606439 259 ntBASIC5.35□□□□□ -1.55
HMCN1Q96RW7 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 RPSAP52-203ENST00000622976 1023 ntBASIC5.35□□□□□ -1.55
HMCN1Q96RW7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 AL391422.3-201ENST00000603791 2761 ntBASIC5.35□□□□□ -1.55
HMCN1Q96RW7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 AL163051.1-201ENST00000569214 1512 ntBASIC5.35□□□□□ -1.55
HMCN1Q96RW7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 Z98882.1-201ENST00000622160 2253 ntBASIC5.35□□□□□ -1.55
HMCN1Q96RW7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC5.35□□□□□ -1.55
HMCN1Q96RW7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 HNRNPA3P5-201ENST00000455201 833 ntBASIC5.35□□□□□ -1.55
HMCN1Q96RW7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 AC104989.1-201ENST00000519711 778 ntBASIC5.35□□□□□ -1.55
HMCN1Q96RW7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 AC004790.1-201ENST00000612686 536 ntBASIC5.35□□□□□ -1.55
HMCN1Q96RW7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 CSF2RBP1-201ENST00000447905 391 ntBASIC5.35□□□□□ -1.55
HMCN1Q96RW7 MYCLP2-201ENST00000449268 967 ntBASIC5.35□□□□□ -1.55
HMCN1Q96RW7 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 AC135586.1-201ENST00000539323 574 ntBASIC5.35□□□□□ -1.55
HMCN1Q96RW7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMCN1Q96RW7 AL049757.1-201ENST00000616842 1596 ntBASIC5.35□□□□□ -1.55
HMCN1Q96RW7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMCN1Q96RW7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMCN1Q96RW7 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMCN1Q96RW7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMCN1Q96RW7 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC5.34□□□□□ -1.55
HMCN1Q96RW7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMCN1Q96RW7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC5.34□□□□□ -1.55
HMCN1Q96RW7 FAM86HP-204ENST00000513466 959 ntBASIC5.34□□□□□ -1.55
HMCN1Q96RW7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC5.34□□□□□ -1.55
HMCN1Q96RW7 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMCN1Q96RW7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMCN1Q96RW7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMCN1Q96RW7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
HMCN1Q96RW7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMCN1Q96RW7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMCN1Q96RW7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMCN1Q96RW7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMCN1Q96RW7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMCN1Q96RW7 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMCN1Q96RW7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMCN1Q96RW7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMCN1Q96RW7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMCN1Q96RW7 RN7SL769P-201ENST00000469386 295 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms