Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 FAM210CP-201ENST00000445714 574 ntBASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MS4A4EQ96PG1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 HLA-J-201ENST00000462773 1622 ntBASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 TSPY22P-201ENST00000427496 604 ntBASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 GUSBP12-201ENST00000513727 720 ntBASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 AC011498.5-201ENST00000592027 486 ntBASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 LINC01451-201ENST00000623792 534 ntBASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 AL121956.5-201ENST00000625261 221 ntBASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 BX276092.7-203ENST00000637198 1536 ntBASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MS4A4EQ96PG1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 AL031133.1-201ENST00000406807 723 ntBASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 AC020916.1-201ENST00000587762 1774 ntBASIC16.59■□□□□ 0.25
MS4A4EQ96PG1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MS4A4EQ96PG1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
MS4A4EQ96PG1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MS4A4EQ96PG1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
MS4A4EQ96PG1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
MS4A4EQ96PG1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
MS4A4EQ96PG1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MS4A4EQ96PG1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.58■□□□□ 0.25
MS4A4EQ96PG1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MS4A4EQ96PG1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MS4A4EQ96PG1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
MS4A4EQ96PG1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MS4A4EQ96PG1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.58■□□□□ 0.24
MS4A4EQ96PG1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
MS4A4EQ96PG1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.58■□□□□ 0.24
MS4A4EQ96PG1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MS4A4EQ96PG1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.58■□□□□ 0.24
MS4A4EQ96PG1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms