Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.32■□□□□ 0.04
CMTM3Q96MX0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.32■□□□□ 0.04
CMTM3Q96MX0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.32■□□□□ 0.04
CMTM3Q96MX0 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.32■□□□□ 0.04
CMTM3Q96MX0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.32■□□□□ 0.04
CMTM3Q96MX0 AC104390.1-201ENST00000555663 520 ntBASIC15.32■□□□□ 0.04
CMTM3Q96MX0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.32■□□□□ 0.04
CMTM3Q96MX0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.32■□□□□ 0.04
CMTM3Q96MX0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.32■□□□□ 0.04
CMTM3Q96MX0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CMTM3Q96MX0 AC026691.1-201ENST00000602502 2017 ntBASIC15.32■□□□□ 0.04
CMTM3Q96MX0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CMTM3Q96MX0 FSCN1P1-201ENST00000568912 1481 ntBASIC15.32■□□□□ 0.04
CMTM3Q96MX0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CMTM3Q96MX0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CMTM3Q96MX0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CMTM3Q96MX0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CMTM3Q96MX0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CMTM3Q96MX0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CMTM3Q96MX0 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 PCDH8P1-201ENST00000428983 2773 ntBASIC15.3■□□□□ 0.04
CMTM3Q96MX0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 AC069152.1-201ENST00000438030 544 ntBASIC15.3■□□□□ 0.04
CMTM3Q96MX0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.3■□□□□ 0.04
CMTM3Q96MX0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms