Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
FGD4Q96M96 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FGD4Q96M96 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FGD4Q96M96 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
FGD4Q96M96 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FGD4Q96M96 AC100803.2-201ENST00000562459 1963 ntBASIC20.06■□□□□ 0.8
FGD4Q96M96 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FGD4Q96M96 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FGD4Q96M96 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.06■□□□□ 0.8
FGD4Q96M96 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FGD4Q96M96 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FGD4Q96M96 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
FGD4Q96M96 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FGD4Q96M96 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FGD4Q96M96 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FGD4Q96M96 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.06■□□□□ 0.8
FGD4Q96M96 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
FGD4Q96M96 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FGD4Q96M96 KRT18P2-201ENST00000447938 1258 ntBASIC20.06■□□□□ 0.8
FGD4Q96M96 AC136632.2-201ENST00000512891 861 ntBASIC20.06■□□□□ 0.8
FGD4Q96M96 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.06■□□□□ 0.8
FGD4Q96M96 AC040169.1-201ENST00000565382 521 ntBASIC20.06■□□□□ 0.8
FGD4Q96M96 AC004706.3-202ENST00000621574 984 ntBASIC20.06■□□□□ 0.8
FGD4Q96M96 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
FGD4Q96M96 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.06■□□□□ 0.8
FGD4Q96M96 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FGD4Q96M96 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.06■□□□□ 0.8
FGD4Q96M96 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
FGD4Q96M96 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.05■□□□□ 0.8
FGD4Q96M96 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FGD4Q96M96 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
FGD4Q96M96 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FGD4Q96M96 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
FGD4Q96M96 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FGD4Q96M96 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FGD4Q96M96 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FGD4Q96M96 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
FGD4Q96M96 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.05■□□□□ 0.8
FGD4Q96M96 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FGD4Q96M96 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.05■□□□□ 0.8
FGD4Q96M96 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
FGD4Q96M96 AC004832.2-201ENST00000426397 482 ntBASIC20.05■□□□□ 0.8
FGD4Q96M96 AC108751.1-201ENST00000490852 363 ntBASIC20.05■□□□□ 0.8
FGD4Q96M96 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FGD4Q96M96 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.05■□□□□ 0.8
FGD4Q96M96 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.05■□□□□ 0.8
FGD4Q96M96 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
FGD4Q96M96 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FGD4Q96M96 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FGD4Q96M96 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.05■□□□□ 0.8
FGD4Q96M96 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.05■□□□□ 0.8
FGD4Q96M96 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FGD4Q96M96 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FGD4Q96M96 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.05■□□□□ 0.8
FGD4Q96M96 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
FGD4Q96M96 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FGD4Q96M96 AC022898.2-201ENST00000616822 1312 ntBASIC20.04■□□□□ 0.8
FGD4Q96M96 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FGD4Q96M96 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FGD4Q96M96 AC006504.4-201ENST00000592118 1568 ntBASIC20.04■□□□□ 0.8
FGD4Q96M96 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
FGD4Q96M96 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
FGD4Q96M96 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FGD4Q96M96 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FGD4Q96M96 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.04■□□□□ 0.8
FGD4Q96M96 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.04■□□□□ 0.8
FGD4Q96M96 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FGD4Q96M96 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FGD4Q96M96 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
FGD4Q96M96 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FGD4Q96M96 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.04■□□□□ 0.8
FGD4Q96M96 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
FGD4Q96M96 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
FGD4Q96M96 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FGD4Q96M96 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
FGD4Q96M96 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.04■□□□□ 0.8
FGD4Q96M96 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.04■□□□□ 0.8
FGD4Q96M96 AC023274.1-201ENST00000418278 595 ntBASIC20.04■□□□□ 0.8
FGD4Q96M96 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
FGD4Q96M96 RNA5SP416-201ENST00000516838 111 ntBASIC20.04■□□□□ 0.8
FGD4Q96M96 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.04■□□□□ 0.8
FGD4Q96M96 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.04■□□□□ 0.8
FGD4Q96M96 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
FGD4Q96M96 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.04■□□□□ 0.8
FGD4Q96M96 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.04■□□□□ 0.8
FGD4Q96M96 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.04■□□□□ 0.8
FGD4Q96M96 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
FGD4Q96M96 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.04■□□□□ 0.8
FGD4Q96M96 AC064836.3-201ENST00000607928 673 ntBASIC20.04■□□□□ 0.8
FGD4Q96M96 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.04■□□□□ 0.8
FGD4Q96M96 AL589182.2-201ENST00000619332 1049 ntBASIC20.04■□□□□ 0.8
FGD4Q96M96 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.04■□□□□ 0.8
FGD4Q96M96 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.04■□□□□ 0.8
FGD4Q96M96 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
FGD4Q96M96 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.04■□□□□ 0.8
FGD4Q96M96 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
FGD4Q96M96 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FGD4Q96M96 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
FGD4Q96M96 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FGD4Q96M96 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms