Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM11Q96F44 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TRIM11Q96F44 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM11Q96F44 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM11Q96F44 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM11Q96F44 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM11Q96F44 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM11Q96F44 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM11Q96F44 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRIM11Q96F44 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRIM11Q96F44 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM11Q96F44 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRIM11Q96F44 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRIM11Q96F44 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM11Q96F44 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM11Q96F44 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM11Q96F44 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM11Q96F44 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM11Q96F44 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRIM11Q96F44 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM11Q96F44 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM11Q96F44 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM11Q96F44 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM11Q96F44 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM11Q96F44 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM11Q96F44 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
TRIM11Q96F44 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM11Q96F44 REXO1L11P-201ENST00000620964 1927 ntBASIC18.82■□□□□ 0.6
TRIM11Q96F44 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRIM11Q96F44 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM11Q96F44 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM11Q96F44 LINC01311-201ENST00000565162 1445 ntBASIC18.82■□□□□ 0.6
TRIM11Q96F44 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM11Q96F44 AL645608.8-201ENST00000606034 2086 ntBASIC18.81■□□□□ 0.6
TRIM11Q96F44 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM11Q96F44 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM11Q96F44 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM11Q96F44 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM11Q96F44 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM11Q96F44 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRIM11Q96F44 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM11Q96F44 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM11Q96F44 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM11Q96F44 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM11Q96F44 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM11Q96F44 MTCL1P1-201ENST00000446207 792 ntBASIC18.81■□□□□ 0.6
TRIM11Q96F44 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM11Q96F44 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM11Q96F44 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM11Q96F44 AL390719.2-201ENST00000606993 987 ntBASIC18.81■□□□□ 0.6
TRIM11Q96F44 HYMAI.1-201ENST00000620949 238 ntBASIC18.81■□□□□ 0.6
TRIM11Q96F44 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM11Q96F44 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM11Q96F44 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM11Q96F44 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRIM11Q96F44 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM11Q96F44 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM11Q96F44 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM11Q96F44 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM11Q96F44 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM11Q96F44 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM11Q96F44 AC139713.2-201ENST00000641328 2723 ntBASIC18.8■□□□□ 0.6
TRIM11Q96F44 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM11Q96F44 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM11Q96F44 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM11Q96F44 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM11Q96F44 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM11Q96F44 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM11Q96F44 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM11Q96F44 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM11Q96F44 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.8■□□□□ 0.6
TRIM11Q96F44 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM11Q96F44 LINC01238-205ENST00000567549 1107 ntBASIC18.8■□□□□ 0.6
TRIM11Q96F44 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM11Q96F44 AC005332.3-201ENST00000589904 676 ntBASIC18.8■□□□□ 0.6
TRIM11Q96F44 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM11Q96F44 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TRIM11Q96F44 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM11Q96F44 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.8■□□□□ 0.6
TRIM11Q96F44 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM11Q96F44 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM11Q96F44 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM11Q96F44 AC141586.5-201ENST00000624546 2050 ntBASIC18.8■□□□□ 0.6
TRIM11Q96F44 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM11Q96F44 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM11Q96F44 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM11Q96F44 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM11Q96F44 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM11Q96F44 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM11Q96F44 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM11Q96F44 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM11Q96F44 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM11Q96F44 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM11Q96F44 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRIM11Q96F44 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRIM11Q96F44 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM11Q96F44 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM11Q96F44 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM11Q96F44 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM11Q96F44 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms