Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 AGGF1P2-201ENST00000426656 2106 ntBASIC16.93■□□□□ 0.3
LRRC58Q96CX6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 SEC1P-202ENST00000473944 940 ntBASIC16.92■□□□□ 0.3
LRRC58Q96CX6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 UBALD1-205ENST00000590891 2641 ntBASIC16.92■□□□□ 0.3
LRRC58Q96CX6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC58Q96CX6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 AC012618.2-201ENST00000428058 849 ntBASIC16.91■□□□□ 0.3
LRRC58Q96CX6 AC007663.1-201ENST00000438948 1240 ntBASIC16.91■□□□□ 0.3
LRRC58Q96CX6 DDX43P3-201ENST00000441064 443 ntBASIC16.91■□□□□ 0.3
LRRC58Q96CX6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 AC026471.5-201ENST00000615068 467 ntBASIC16.91■□□□□ 0.3
LRRC58Q96CX6 AL049637.2-201ENST00000641778 930 ntBASIC16.91■□□□□ 0.3
LRRC58Q96CX6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.91■□□□□ 0.3
LRRC58Q96CX6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC58Q96CX6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms