Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 LINC01126-201ENST00000623515 1646 ntBASIC14.77□□□□□ -0.04
CCDC168Q8NDH2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.77□□□□□ -0.04
CCDC168Q8NDH2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC168Q8NDH2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.77□□□□□ -0.04
CCDC168Q8NDH2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC168Q8NDH2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC168Q8NDH2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CCDC168Q8NDH2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC168Q8NDH2 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 HILS1-202ENST00000545329 423 ntBASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 AC006116.8-202ENST00000587620 1550 ntBASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 AC009102.3-201ENST00000623118 1491 ntBASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC168Q8NDH2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 AL592309.1-201ENST00000443127 649 ntBASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 PIN1P1-201ENST00000412108 996 ntBASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 KLF2P3-201ENST00000451977 1087 ntBASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 SERBP1P5-201ENST00000510079 1181 ntBASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC168Q8NDH2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 AL020989.1-201ENST00000422979 469 ntBASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 AC141586.3-201ENST00000562166 1838 ntBASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 CU639417.3-201ENST00000624240 1404 ntBASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 AC122714.2-201ENST00000502787 707 ntBASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CCDC168Q8NDH2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms