Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RDH13Q8NBN7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RDH13Q8NBN7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RDH13Q8NBN7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RDH13Q8NBN7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RDH13Q8NBN7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RDH13Q8NBN7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 AL845331.1-201ENST00000424978 1190 ntBASIC19.48■□□□□ 0.71
RDH13Q8NBN7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 AC069148.1-201ENST00000608741 768 ntBASIC19.48■□□□□ 0.71
RDH13Q8NBN7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 AC006116.8-202ENST00000587620 1550 ntBASIC19.48■□□□□ 0.71
RDH13Q8NBN7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RDH13Q8NBN7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 AC091607.1-201ENST00000490318 1060 ntBASIC19.47■□□□□ 0.71
RDH13Q8NBN7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 AC011840.4-201ENST00000578471 627 ntBASIC19.47■□□□□ 0.71
RDH13Q8NBN7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 AP002414.4-201ENST00000589764 1148 ntBASIC19.47■□□□□ 0.71
RDH13Q8NBN7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RDH13Q8NBN7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 UPK3BP1-201ENST00000428678 509 ntBASIC19.46■□□□□ 0.71
RDH13Q8NBN7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RDH13Q8NBN7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.7
RDH13Q8NBN7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RDH13Q8NBN7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RDH13Q8NBN7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RDH13Q8NBN7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RDH13Q8NBN7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RDH13Q8NBN7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RDH13Q8NBN7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RDH13Q8NBN7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.45■□□□□ 0.7
RDH13Q8NBN7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RDH13Q8NBN7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RDH13Q8NBN7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms