Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 KRT16P4-201ENST00000453883 522 ntBASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 AC009533.2-201ENST00000543664 586 ntBASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 AL138831.2-201ENST00000606564 490 ntBASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH20Q8N6Y1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 AC125634.1-201ENST00000438758 1403 ntBASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 AC096582.2-201ENST00000510860 516 ntBASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 LINC01711-201ENST00000598340 967 ntBASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 AL732292.2-201ENST00000609649 430 ntBASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH20Q8N6Y1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 NUS1P2-201ENST00000417358 873 ntBASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 AC114341.1-201ENST00000618070 349 ntBASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 BCL2-203ENST00000589955 5011 ntBASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH20Q8N6Y1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms