Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H3Q8IXZ2 BX276092.5-203ENST00000456199 560 ntBASIC19.25■□□□□ 0.67
ZC3H3Q8IXZ2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.25■□□□□ 0.67
ZC3H3Q8IXZ2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.25■□□□□ 0.67
ZC3H3Q8IXZ2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.25■□□□□ 0.67
ZC3H3Q8IXZ2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H3Q8IXZ2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.25■□□□□ 0.67
ZC3H3Q8IXZ2 AC011840.4-201ENST00000578471 627 ntBASIC19.25■□□□□ 0.67
ZC3H3Q8IXZ2 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.25■□□□□ 0.67
ZC3H3Q8IXZ2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ZC3H3Q8IXZ2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.25■□□□□ 0.67
ZC3H3Q8IXZ2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H3Q8IXZ2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H3Q8IXZ2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H3Q8IXZ2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H3Q8IXZ2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H3Q8IXZ2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H3Q8IXZ2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.25■□□□□ 0.67
ZC3H3Q8IXZ2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H3Q8IXZ2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 PCED1CP-201ENST00000419887 785 ntBASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZC3H3Q8IXZ2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 DRAXINP1-201ENST00000437611 948 ntBASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ZC3H3Q8IXZ2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 TSSC2-201ENST00000450217 709 ntBASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 TPSP2-201ENST00000561760 610 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms