Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC83Q8IWF9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CCDC83Q8IWF9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC83Q8IWF9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC83Q8IWF9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC83Q8IWF9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC83Q8IWF9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC83Q8IWF9 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC83Q8IWF9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC83Q8IWF9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC83Q8IWF9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC83Q8IWF9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC83Q8IWF9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC83Q8IWF9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC83Q8IWF9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
CCDC83Q8IWF9 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC83Q8IWF9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.91■□□□□ 0.94
CCDC83Q8IWF9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.91■□□□□ 0.94
CCDC83Q8IWF9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC83Q8IWF9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC83Q8IWF9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 TSPY12P-201ENST00000421279 868 ntBASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC83Q8IWF9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC83Q8IWF9 AC009053.2-201ENST00000563701 2365 ntBASIC20.89■□□□□ 0.94
CCDC83Q8IWF9 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC83Q8IWF9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CCDC83Q8IWF9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC83Q8IWF9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
CCDC83Q8IWF9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC83Q8IWF9 AP001094.4-201ENST00000579008 2176 ntBASIC20.89■□□□□ 0.94
CCDC83Q8IWF9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
CCDC83Q8IWF9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC83Q8IWF9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CCDC83Q8IWF9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CCDC83Q8IWF9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC83Q8IWF9 AL359075.1-203ENST00000462729 1002 ntBASIC20.89■□□□□ 0.93
CCDC83Q8IWF9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC83Q8IWF9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CCDC83Q8IWF9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC83Q8IWF9 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CCDC83Q8IWF9 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCDC83Q8IWF9 AC006011.2-201ENST00000621313 1158 ntBASIC20.89■□□□□ 0.93
CCDC83Q8IWF9 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC83Q8IWF9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC83Q8IWF9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC83Q8IWF9 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCDC83Q8IWF9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC83Q8IWF9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC83Q8IWF9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC83Q8IWF9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 IGHGP-201ENST00000390555 1178 ntBASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 DDX43P3-201ENST00000441064 443 ntBASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 AC009154.2-201ENST00000621177 724 ntBASIC20.88■□□□□ 0.93
CCDC83Q8IWF9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms