Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
GDPD4Q6W3E5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 SIRPAP1-201ENST00000448467 1770 ntBASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 FGFR3P6-201ENST00000457012 610 ntBASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 AP000867.4-201ENST00000641616 219 ntBASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 AL390961.4-201ENST00000623958 2535 ntBASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 NEFHP1-201ENST00000412845 2629 ntBASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 KRT8P10-201ENST00000450021 1447 ntBASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDPD4Q6W3E5 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms