Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC9.61□□□□□ -0.87
UBR4Q5T4S7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 AC103564.2-201ENST00000432853 1299 ntBASIC9.6□□□□□ -0.87
UBR4Q5T4S7 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 CSF2RBP1-201ENST00000447905 391 ntBASIC9.6□□□□□ -0.87
UBR4Q5T4S7 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 FTLP5-201ENST00000586853 534 ntBASIC9.6□□□□□ -0.87
UBR4Q5T4S7 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 MIR346-201ENST00000362234 95 ntBASIC9.6□□□□□ -0.87
UBR4Q5T4S7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 AC006128.1-201ENST00000624704 1661 ntBASIC9.6□□□□□ -0.87
UBR4Q5T4S7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 GPAA1P2-201ENST00000417923 928 ntBASIC9.6□□□□□ -0.87
UBR4Q5T4S7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 AGER-203ENST00000375065 665 ntTSL 2 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 AC002056.1-201ENST00000395613 760 ntBASIC9.6□□□□□ -0.87
UBR4Q5T4S7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 MTCL1P1-201ENST00000446207 792 ntBASIC9.6□□□□□ -0.87
UBR4Q5T4S7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 AC004840.1-201ENST00000636359 365 ntBASIC9.6□□□□□ -0.87
UBR4Q5T4S7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
UBR4Q5T4S7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 MIR4750-201ENST00000584564 56 ntBASIC9.59□□□□□ -0.87
UBR4Q5T4S7 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 AZGP1P1-201ENST00000411909 902 ntBASIC9.59□□□□□ -0.87
UBR4Q5T4S7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC9.59□□□□□ -0.87
UBR4Q5T4S7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms