Protein–RNA interactions for Protein: Q2VWP7

PRTG, Protogenin, humanhuman

Predictions only

Length 1,150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRTGQ2VWP7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRTGQ2VWP7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRTGQ2VWP7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PRTGQ2VWP7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRTGQ2VWP7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRTGQ2VWP7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRTGQ2VWP7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRTGQ2VWP7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 AC008608.2-201ENST00000606089 416 ntBASIC16.8■□□□□ 0.28
PRTGQ2VWP7 AL031008.1-201ENST00000619963 541 ntBASIC16.8■□□□□ 0.28
PRTGQ2VWP7 AD001527.2-201ENST00000622994 785 ntBASIC16.8■□□□□ 0.28
PRTGQ2VWP7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRTGQ2VWP7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 AC019129.2-201ENST00000609837 1235 ntBASIC16.79■□□□□ 0.28
PRTGQ2VWP7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 NOC2LP1-202ENST00000452600 2235 ntBASIC16.79■□□□□ 0.28
PRTGQ2VWP7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 AL049757.1-201ENST00000616842 1596 ntBASIC16.79■□□□□ 0.28
PRTGQ2VWP7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRTGQ2VWP7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.78■□□□□ 0.28
PRTGQ2VWP7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRTGQ2VWP7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRTGQ2VWP7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRTGQ2VWP7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
PRTGQ2VWP7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.78■□□□□ 0.28
PRTGQ2VWP7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRTGQ2VWP7 PMPCAP1-201ENST00000508114 1576 ntBASIC16.78■□□□□ 0.28
PRTGQ2VWP7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRTGQ2VWP7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRTGQ2VWP7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PRTGQ2VWP7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PRTGQ2VWP7 FGFR3P6-201ENST00000457012 610 ntBASIC16.78■□□□□ 0.28
PRTGQ2VWP7 AL160237.2-201ENST00000556165 472 ntBASIC16.78■□□□□ 0.28
PRTGQ2VWP7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.78■□□□□ 0.28
PRTGQ2VWP7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.78■□□□□ 0.28
PRTGQ2VWP7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.78■□□□□ 0.28
PRTGQ2VWP7 SIRPAP1-201ENST00000448467 1770 ntBASIC16.78■□□□□ 0.28
PRTGQ2VWP7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms