Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RSPO4Q2I0M5 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RSPO4Q2I0M5 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RSPO4Q2I0M5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RSPO4Q2I0M5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RSPO4Q2I0M5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.14■□□□□ 0.34
RSPO4Q2I0M5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
RSPO4Q2I0M5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.14■□□□□ 0.34
RSPO4Q2I0M5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 KLF2P3-201ENST00000451977 1087 ntBASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO4Q2I0M5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 AL512638.1-201ENST00000457493 794 ntBASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 IGHV3-42-201ENST00000520410 361 ntBASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 AL390754.1-201ENST00000619088 582 ntBASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RSPO4Q2I0M5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 AC107890.1-201ENST00000422478 521 ntBASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 RN7SL692P-201ENST00000464677 288 ntBASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 AC122714.2-201ENST00000502787 707 ntBASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 AL805961.1-202ENST00000641562 540 ntBASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 FO538757.1-201ENST00000623083 1397 ntBASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RSPO4Q2I0M5 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RSPO4Q2I0M5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms