Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DSC1Q08554 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.83■□□□□ 0.6
DSC1Q08554 RNA5SP416-201ENST00000516838 111 ntBASIC18.83■□□□□ 0.6
DSC1Q08554 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
DSC1Q08554 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.83■□□□□ 0.6
DSC1Q08554 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DSC1Q08554 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.83■□□□□ 0.6
DSC1Q08554 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.83■□□□□ 0.6
DSC1Q08554 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.83■□□□□ 0.6
DSC1Q08554 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.83■□□□□ 0.6
DSC1Q08554 AC040169.1-201ENST00000565382 521 ntBASIC18.83■□□□□ 0.6
DSC1Q08554 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
DSC1Q08554 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.83■□□□□ 0.6
DSC1Q08554 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
DSC1Q08554 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DSC1Q08554 FLJ13224-201ENST00000313737 1514 ntBASIC18.83■□□□□ 0.6
DSC1Q08554 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.83■□□□□ 0.6
DSC1Q08554 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
DSC1Q08554 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
DSC1Q08554 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DSC1Q08554 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DSC1Q08554 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DSC1Q08554 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DSC1Q08554 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DSC1Q08554 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DSC1Q08554 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.82■□□□□ 0.6
DSC1Q08554 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.82■□□□□ 0.6
DSC1Q08554 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DSC1Q08554 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.82■□□□□ 0.6
DSC1Q08554 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
DSC1Q08554 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.82■□□□□ 0.6
DSC1Q08554 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
DSC1Q08554 AC009336.1-201ENST00000608941 1553 ntBASIC18.82■□□□□ 0.6
DSC1Q08554 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DSC1Q08554 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.82■□□□□ 0.6
DSC1Q08554 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
DSC1Q08554 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.82■□□□□ 0.6
DSC1Q08554 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DSC1Q08554 STK19B-204ENST00000512515 211 ntBASIC18.82■□□□□ 0.6
DSC1Q08554 IGHV3-52-201ENST00000519770 353 ntBASIC18.82■□□□□ 0.6
DSC1Q08554 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.82■□□□□ 0.6
DSC1Q08554 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.82■□□□□ 0.6
DSC1Q08554 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.82■□□□□ 0.6
DSC1Q08554 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.82■□□□□ 0.6
DSC1Q08554 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.82■□□□□ 0.6
DSC1Q08554 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DSC1Q08554 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DSC1Q08554 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.82■□□□□ 0.6
DSC1Q08554 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DSC1Q08554 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.82■□□□□ 0.6
DSC1Q08554 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.82■□□□□ 0.6
DSC1Q08554 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DSC1Q08554 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DSC1Q08554 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
DSC1Q08554 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
DSC1Q08554 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DSC1Q08554 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.81■□□□□ 0.6
DSC1Q08554 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DSC1Q08554 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DSC1Q08554 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.81■□□□□ 0.6
DSC1Q08554 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DSC1Q08554 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DSC1Q08554 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.81■□□□□ 0.6
DSC1Q08554 AC005104.2-201ENST00000427818 678 ntBASIC18.81■□□□□ 0.6
DSC1Q08554 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.81■□□□□ 0.6
DSC1Q08554 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.81■□□□□ 0.6
DSC1Q08554 AC064836.3-201ENST00000607928 673 ntBASIC18.81■□□□□ 0.6
DSC1Q08554 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DSC1Q08554 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DSC1Q08554 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
DSC1Q08554 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DSC1Q08554 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
DSC1Q08554 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
DSC1Q08554 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DSC1Q08554 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
DSC1Q08554 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DSC1Q08554 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
DSC1Q08554 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DSC1Q08554 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
DSC1Q08554 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.81■□□□□ 0.6
DSC1Q08554 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DSC1Q08554 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DSC1Q08554 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.8■□□□□ 0.6
DSC1Q08554 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DSC1Q08554 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
DSC1Q08554 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DSC1Q08554 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DSC1Q08554 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
DSC1Q08554 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DSC1Q08554 AC004408.2-201ENST00000623613 2777 ntBASIC18.8■□□□□ 0.6
DSC1Q08554 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DSC1Q08554 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.8■□□□□ 0.6
DSC1Q08554 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DSC1Q08554 YBX2P1-201ENST00000394192 760 ntBASIC18.8■□□□□ 0.6
DSC1Q08554 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DSC1Q08554 UPF3AP3-201ENST00000420996 769 ntBASIC18.8■□□□□ 0.6
DSC1Q08554 AC004832.2-201ENST00000426397 482 ntBASIC18.8■□□□□ 0.6
DSC1Q08554 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.8■□□□□ 0.6
DSC1Q08554 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.8■□□□□ 0.6
DSC1Q08554 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms