Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.54■□□□□ 0.72
ATN1P54259 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATN1P54259 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATN1P54259 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATN1P54259 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATN1P54259 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATN1P54259 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATN1P54259 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATN1P54259 GMCL1P1-201ENST00000463439 1581 ntBASIC19.53■□□□□ 0.72
ATN1P54259 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATN1P54259 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATN1P54259 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATN1P54259 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATN1P54259 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATN1P54259 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATN1P54259 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.53■□□□□ 0.72
ATN1P54259 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
ATN1P54259 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.53■□□□□ 0.72
ATN1P54259 AC004461.1-201ENST00000412461 403 ntBASIC19.53■□□□□ 0.72
ATN1P54259 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.53■□□□□ 0.72
ATN1P54259 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC19.53■□□□□ 0.72
ATN1P54259 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.53■□□□□ 0.72
ATN1P54259 AL513210.1-201ENST00000629608 234 ntBASIC19.53■□□□□ 0.72
ATN1P54259 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATN1P54259 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
ATN1P54259 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATN1P54259 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ATN1P54259 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATN1P54259 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATN1P54259 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.53■□□□□ 0.72
ATN1P54259 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ATN1P54259 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATN1P54259 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATN1P54259 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ATN1P54259 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATN1P54259 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATN1P54259 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.52■□□□□ 0.72
ATN1P54259 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.52■□□□□ 0.72
ATN1P54259 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATN1P54259 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATN1P54259 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.52■□□□□ 0.72
ATN1P54259 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.52■□□□□ 0.72
ATN1P54259 COX5BP2-201ENST00000392354 334 ntBASIC19.52■□□□□ 0.72
ATN1P54259 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.52■□□□□ 0.72
ATN1P54259 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.52■□□□□ 0.72
ATN1P54259 AC109322.1-201ENST00000524499 1264 ntBASIC19.52■□□□□ 0.72
ATN1P54259 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
ATN1P54259 AC006518.1-201ENST00000541449 943 ntBASIC19.52■□□□□ 0.72
ATN1P54259 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATN1P54259 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATN1P54259 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
ATN1P54259 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATN1P54259 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ATN1P54259 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
ATN1P54259 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATN1P54259 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATN1P54259 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATN1P54259 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATN1P54259 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATN1P54259 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATN1P54259 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATN1P54259 KLF4P1-201ENST00000412782 1185 ntBASIC19.51■□□□□ 0.71
ATN1P54259 AL603841.1-201ENST00000430516 664 ntBASIC19.51■□□□□ 0.71
ATN1P54259 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.51■□□□□ 0.71
ATN1P54259 SIGLEC30P-201ENST00000455569 941 ntBASIC19.51■□□□□ 0.71
ATN1P54259 AC069262.1-201ENST00000539058 672 ntBASIC19.51■□□□□ 0.71
ATN1P54259 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATN1P54259 AC025678.2-201ENST00000562061 970 ntBASIC19.51■□□□□ 0.71
ATN1P54259 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.51■□□□□ 0.71
ATN1P54259 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.51■□□□□ 0.71
ATN1P54259 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.51■□□□□ 0.71
ATN1P54259 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.51■□□□□ 0.71
ATN1P54259 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.51■□□□□ 0.71
ATN1P54259 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ATN1P54259 AL353593.2-201ENST00000602529 1483 ntBASIC19.51■□□□□ 0.71
ATN1P54259 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.51■□□□□ 0.71
ATN1P54259 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATN1P54259 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATN1P54259 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATN1P54259 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.51■□□□□ 0.71
ATN1P54259 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATN1P54259 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATN1P54259 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATN1P54259 AC073130.3-201ENST00000624389 2278 ntBASIC19.5■□□□□ 0.71
ATN1P54259 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATN1P54259 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.5■□□□□ 0.71
ATN1P54259 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.5■□□□□ 0.71
ATN1P54259 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATN1P54259 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATN1P54259 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.5■□□□□ 0.71
ATN1P54259 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.5■□□□□ 0.71
ATN1P54259 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.5■□□□□ 0.71
ATN1P54259 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.5■□□□□ 0.71
ATN1P54259 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.5■□□□□ 0.71
ATN1P54259 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
ATN1P54259 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
ATN1P54259 AC105339.1-204ENST00000636249 355 ntBASIC19.5■□□□□ 0.71
ATN1P54259 AC092902.6-201ENST00000641783 218 ntBASIC19.5■□□□□ 0.71
ATN1P54259 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
ATN1P54259 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms