Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.62■□□□□ 0.73
CPT1AP50416 STK25P1-201ENST00000585406 838 ntBASIC19.62■□□□□ 0.73
CPT1AP50416 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.62■□□□□ 0.73
CPT1AP50416 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.62■□□□□ 0.73
CPT1AP50416 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.62■□□□□ 0.73
CPT1AP50416 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPT1AP50416 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.62■□□□□ 0.73
CPT1AP50416 AC093677.2-201ENST00000600169 1863 ntBASIC19.62■□□□□ 0.73
CPT1AP50416 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CPT1AP50416 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.62■□□□□ 0.73
CPT1AP50416 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.62■□□□□ 0.73
CPT1AP50416 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPT1AP50416 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CPT1AP50416 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CPT1AP50416 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CPT1AP50416 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPT1AP50416 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPT1AP50416 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.61■□□□□ 0.73
CPT1AP50416 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPT1AP50416 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPT1AP50416 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPT1AP50416 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPT1AP50416 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPT1AP50416 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.61■□□□□ 0.73
CPT1AP50416 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.61■□□□□ 0.73
CPT1AP50416 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.61■□□□□ 0.73
CPT1AP50416 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.61■□□□□ 0.73
CPT1AP50416 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.61■□□□□ 0.73
CPT1AP50416 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.61■□□□□ 0.73
CPT1AP50416 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.61■□□□□ 0.73
CPT1AP50416 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.61■□□□□ 0.73
CPT1AP50416 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPT1AP50416 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPT1AP50416 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CPT1AP50416 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPT1AP50416 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPT1AP50416 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPT1AP50416 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CPT1AP50416 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.61■□□□□ 0.73
CPT1AP50416 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.61■□□□□ 0.73
CPT1AP50416 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.61■□□□□ 0.73
CPT1AP50416 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPT1AP50416 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPT1AP50416 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.6■□□□□ 0.73
CPT1AP50416 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.6■□□□□ 0.73
CPT1AP50416 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.6■□□□□ 0.73
CPT1AP50416 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.6■□□□□ 0.73
CPT1AP50416 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPT1AP50416 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPT1AP50416 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.6■□□□□ 0.73
CPT1AP50416 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPT1AP50416 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.6■□□□□ 0.73
CPT1AP50416 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPT1AP50416 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPT1AP50416 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.6■□□□□ 0.73
CPT1AP50416 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.6■□□□□ 0.73
CPT1AP50416 HCG4B-203ENST00000450128 991 ntBASIC19.6■□□□□ 0.73
CPT1AP50416 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.6■□□□□ 0.73
CPT1AP50416 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.6■□□□□ 0.73
CPT1AP50416 AL805961.1-202ENST00000641562 540 ntBASIC19.6■□□□□ 0.73
CPT1AP50416 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPT1AP50416 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CPT1AP50416 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.6■□□□□ 0.73
CPT1AP50416 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPT1AP50416 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.6■□□□□ 0.73
CPT1AP50416 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.6■□□□□ 0.73
CPT1AP50416 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPT1AP50416 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPT1AP50416 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPT1AP50416 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPT1AP50416 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPT1AP50416 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.59■□□□□ 0.73
CPT1AP50416 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPT1AP50416 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CPT1AP50416 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPT1AP50416 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPT1AP50416 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPT1AP50416 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPT1AP50416 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPT1AP50416 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPT1AP50416 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.59■□□□□ 0.73
CPT1AP50416 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPT1AP50416 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPT1AP50416 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.59■□□□□ 0.73
CPT1AP50416 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPT1AP50416 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.59■□□□□ 0.73
CPT1AP50416 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
CPT1AP50416 YBX1P5-201ENST00000509441 847 ntBASIC19.59■□□□□ 0.73
CPT1AP50416 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CPT1AP50416 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.59■□□□□ 0.73
CPT1AP50416 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.59■□□□□ 0.73
CPT1AP50416 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.59■□□□□ 0.73
CPT1AP50416 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPT1AP50416 AC004790.2-201ENST00000623588 572 ntBASIC19.59■□□□□ 0.73
CPT1AP50416 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPT1AP50416 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPT1AP50416 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPT1AP50416 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPT1AP50416 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPT1AP50416 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms